Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm9775-201ENSMUST00000189402 331 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm37193-201ENSMUST00000193087 513 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm38018-201ENSMUST00000195651 540 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm42516-201ENSMUST00000198691 767 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm44887-201ENSMUST00000208980 178 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm36247-201ENSMUST00000211834 285 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm4263-202ENSMUST00000221392 667 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm24147-201ENSMUST00000082763 144 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm42479-201ENSMUST00000198654 1356 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm22890-201ENSMUST00000158642 144 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm22108-201ENSMUST00000177961 106 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm24798-201ENSMUST00000179334 106 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29525-201ENSMUST00000189844 699 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29523-201ENSMUST00000191415 699 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm45327-201ENSMUST00000211612 565 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm21089-201ENSMUST00000215843 325 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 AL645546.2-201ENSMUST00000224526 265 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Snord15a-201ENSMUST00000083888 148 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc39Q9D5Y1 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
Ccdc39Q9D5Y1 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm6071-201ENSMUST00000119561 440 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm11890-201ENSMUST00000119585 417 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm12294-201ENSMUST00000119723 490 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm14739-201ENSMUST00000120424 802 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm12001-201ENSMUST00000121727 913 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Mir1934-201ENSMUST00000158127 83 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm26141-201ENSMUST00000175299 126 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm25525-201ENSMUST00000177701 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm26178-201ENSMUST00000177706 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm26465-201ENSMUST00000178517 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm24317-201ENSMUST00000178536 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm25021-201ENSMUST00000179184 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm22995-201ENSMUST00000179670 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm24424-201ENSMUST00000179714 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm24389-201ENSMUST00000179962 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm25672-201ENSMUST00000180111 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm27535-201ENSMUST00000183814 157 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm28594-201ENSMUST00000187022 661 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm29163-201ENSMUST00000188029 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm28191-201ENSMUST00000189112 211 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm2314-201ENSMUST00000200391 586 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm7407-201ENSMUST00000208301 568 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Snora31-201ENSMUST00000083213 130 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm23815-201ENSMUST00000083231 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm23520-201ENSMUST00000093736 107 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc39Q9D5Y1 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.26□□□□□ -1.73
Ccdc39Q9D5Y1 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc39Q9D5Y1 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc39Q9D5Y1 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.26□□□□□ -1.73
Ccdc39Q9D5Y1 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms