Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.94□□□□□ -1.62
Ddx56Q9D0R4 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm14579-201ENSMUST00000117068 283 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm22793-201ENSMUST00000157227 330 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm22870-201ENSMUST00000157501 112 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm26347-201ENSMUST00000157526 131 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Mir5103-201ENSMUST00000175111 79 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Mir3058-201ENSMUST00000175126 91 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm38075-201ENSMUST00000191979 920 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm43856-201ENSMUST00000197004 369 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm17775-201ENSMUST00000198542 258 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm44330-201ENSMUST00000200106 143 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm43424-201ENSMUST00000200484 253 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm45049-201ENSMUST00000207586 591 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm18903-201ENSMUST00000215343 480 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm23626-201ENSMUST00000082458 133 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Snora52-201ENSMUST00000082732 137 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Mir17-201ENSMUST00000083574 84 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm22155-201ENSMUST00000083836 162 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ddx56Q9D0R4 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 AC167192.3-201ENSMUST00000224096 1567 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm13349-201ENSMUST00000118436 411 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm13082-201ENSMUST00000118877 561 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm14835-201ENSMUST00000119039 315 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm15266-201ENSMUST00000119635 255 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm26348-201ENSMUST00000157528 240 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm23022-201ENSMUST00000158768 180 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm24968-201ENSMUST00000179817 107 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm37636-201ENSMUST00000193583 359 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm37167-201ENSMUST00000194946 396 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm43489-201ENSMUST00000196810 993 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm5551-201ENSMUST00000199720 690 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm44184-201ENSMUST00000204290 132 ntBASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.92□□□□□ -1.62
Ddx56Q9D0R4 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms