Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Gm23824-201ENSMUST00000158741 276 ntBASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Gm20399-201ENSMUST00000174652 132 ntBASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Gm29534-201ENSMUST00000187328 382 ntBASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Gm42919-201ENSMUST00000197753 1284 ntBASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Gm20177-201ENSMUST00000203705 334 ntBASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Gm44232-201ENSMUST00000204537 225 ntBASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Gm7540-201ENSMUST00000219764 926 ntBASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Gm8785-201ENSMUST00000220259 487 ntBASIC4.25□□□□□ -1.73
Ccdc47Q9D024 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.25□□□□□ -1.73
Ccdc47Q9D024 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Gm26176-201ENSMUST00000083795 105 ntBASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc47Q9D024 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc47Q9D024 BC051076-202ENSMUST00000199477 2868 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm5754-201ENSMUST00000118774 892 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm13155-201ENSMUST00000119277 646 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm12543-201ENSMUST00000120410 543 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm12578-201ENSMUST00000121244 417 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm8178-201ENSMUST00000121570 646 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm15367-201ENSMUST00000122398 1016 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm16373-201ENSMUST00000129517 303 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm27903-201ENSMUST00000175482 126 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm37617-201ENSMUST00000194309 159 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm43476-201ENSMUST00000197873 405 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc47Q9D024 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc47Q9D024 Gm42968-201ENSMUST00000198578 1372 ntBASIC4.24□□□□□ -1.73
Ccdc47Q9D024 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Mir690-201ENSMUST00000102110 109 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm12587-201ENSMUST00000120180 427 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm6079-201ENSMUST00000121356 404 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm27535-201ENSMUST00000183814 157 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Mir7028-201ENSMUST00000185016 64 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm29523-201ENSMUST00000191415 699 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm34272-201ENSMUST00000208886 253 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm45608-201ENSMUST00000210948 389 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 AC153801.1-201ENSMUST00000217904 947 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm8249-201ENSMUST00000219225 465 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm5175-202ENSMUST00000219699 529 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm8274-201ENSMUST00000219820 463 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 AC125539.1-202ENSMUST00000226449 670 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm7204-201ENSMUST00000062591 600 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc47Q9D024 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Gm14570-201ENSMUST00000119444 391 ntBASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Gm11830-201ENSMUST00000120175 561 ntBASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Gm16471-201ENSMUST00000121940 618 ntBASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Gm13487-201ENSMUST00000122240 864 ntBASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Gm22840-201ENSMUST00000158444 136 ntBASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Gm20773-201ENSMUST00000178940 681 ntBASIC4.22□□□□□ -1.73
Ccdc47Q9D024 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc47Q9D024 Gm5552-201ENSMUST00000197149 515 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms