Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm11829-201ENSMUST00000121003 282 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm8244-201ENSMUST00000121254 264 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm11797-201ENSMUST00000121336 754 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm7618-201ENSMUST00000121643 171 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm14800-201ENSMUST00000122084 1272 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Spin2g-201ENSMUST00000178425 687 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm3933-201ENSMUST00000195391 439 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm26121-201ENSMUST00000083364 162 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Mir193a-201ENSMUST00000083461 66 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 BC051076-202ENSMUST00000199477 2868 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm25727-201ENSMUST00000104522 131 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm13268-201ENSMUST00000117485 433 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm22889-201ENSMUST00000158639 58 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm24666-201ENSMUST00000158937 167 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm37164-201ENSMUST00000192809 637 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm37319-201ENSMUST00000193500 636 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm6064-201ENSMUST00000203999 454 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm8035-201ENSMUST00000204625 687 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm6929-201ENSMUST00000210930 468 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.25□□□□□ -1.73
Smc1aQ9CU62 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Smc1aQ9CU62 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm23133-201ENSMUST00000104255 135 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm15783-201ENSMUST00000117521 633 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm15994-201ENSMUST00000118029 402 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm12587-201ENSMUST00000120180 427 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm17155-201ENSMUST00000165969 473 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Mir6385-201ENSMUST00000184295 105 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm18505-201ENSMUST00000187360 790 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm6112-201ENSMUST00000208037 629 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm5265-201ENSMUST00000076828 342 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Mir370-201ENSMUST00000083499 79 ntBASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Smc1aQ9CU62 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm24982-201ENSMUST00000104456 132 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm15268-201ENSMUST00000118845 352 ntBASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.23□□□□□ -1.73
Smc1aQ9CU62 Gm22036-201ENSMUST00000157279 215 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms