Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm37064-201ENSMUST00000193851 2231 ntBASIC2.84□□□□□ -1.96
RTRAFQ9CQE8 Gm5362-201ENSMUST00000211968 3085 ntBASIC2.84□□□□□ -1.96
RTRAFQ9CQE8 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm24715-201ENSMUST00000102377 95 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm22370-201ENSMUST00000102422 83 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm26067-201ENSMUST00000103789 110 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm11600-201ENSMUST00000119592 240 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm14810-201ENSMUST00000121628 486 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm14907-201ENSMUST00000121948 854 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm14903-201ENSMUST00000122435 537 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm25967-201ENSMUST00000157168 147 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm23592-201ENSMUST00000157859 117 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm25436-201ENSMUST00000158275 145 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm18415-201ENSMUST00000177464 647 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm21809-201ENSMUST00000178495 468 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm2092-201ENSMUST00000178887 639 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm17412-201ENSMUST00000179261 468 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm2759-201ENSMUST00000179938 639 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 S100a11-ps-201ENSMUST00000181735 306 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm43853-201ENSMUST00000197162 301 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm19243-201ENSMUST00000198592 269 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm18016-201ENSMUST00000216119 801 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm18388-201ENSMUST00000222339 557 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm43871-201ENSMUST00000204931 1955 ntBASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RTRAFQ9CQE8 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm15161-201ENSMUST00000117340 387 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm12739-201ENSMUST00000119769 382 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm12190-201ENSMUST00000120001 187 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm15387-201ENSMUST00000120421 648 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Magea9-ps-201ENSMUST00000140655 732 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Ighv8-1-201ENSMUST00000194897 291 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm37418-201ENSMUST00000195031 274 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm44294-201ENSMUST00000205090 728 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm4501-201ENSMUST00000207330 551 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm4528-201ENSMUST00000207905 551 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 AC158631.2-201ENSMUST00000219999 478 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 AC154241.1-201ENSMUST00000223952 356 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm5518-201ENSMUST00000084171 648 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 AC154634.4-201ENSMUST00000226077 2665 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.82□□□□□ -1.96
RTRAFQ9CQE8 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms