Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim11Q99PQ2 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim11Q99PQ2 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim11Q99PQ2 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.88□□□□□ -1.47
Trim11Q99PQ2 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm25088-201ENSMUST00000101803 79 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm12245-201ENSMUST00000117266 357 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm6893-201ENSMUST00000118385 522 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm13880-201ENSMUST00000118421 474 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm14082-201ENSMUST00000118582 801 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm15211-201ENSMUST00000118932 528 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm5942-201ENSMUST00000120046 439 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm16100-201ENSMUST00000120489 231 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm8289-201ENSMUST00000144814 1182 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm22791-201ENSMUST00000157232 145 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Mir5624-201ENSMUST00000176635 61 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm29262-201ENSMUST00000190084 196 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm42542-201ENSMUST00000197978 268 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm44475-201ENSMUST00000204041 424 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm44820-201ENSMUST00000207420 396 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm16415-201ENSMUST00000080097 489 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm23733-201ENSMUST00000083750 106 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim11Q99PQ2 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm11486-201ENSMUST00000107322 478 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm3943-201ENSMUST00000118606 718 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm14647-201ENSMUST00000119392 680 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm25334-201ENSMUST00000158036 110 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm22765-201ENSMUST00000158371 128 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm3531-201ENSMUST00000162698 489 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm17062-201ENSMUST00000166987 461 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm23191-201ENSMUST00000179147 107 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm23144-201ENSMUST00000180226 107 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28604-201ENSMUST00000186629 484 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28566-201ENSMUST00000186714 484 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28194-201ENSMUST00000187412 484 ntBASIC5.86□□□□□ -1.47
Trim11Q99PQ2 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms