Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Msh4Q99MT2 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.26□□□□□ -1.73
Msh4Q99MT2 Svet1-201ENSMUST00000209370 3940 ntBASIC4.26□□□□□ -1.73
Msh4Q99MT2 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Msh4Q99MT2 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
Msh4Q99MT2 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Msh4Q99MT2 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm12852-201ENSMUST00000119478 719 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm12495-201ENSMUST00000119750 447 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm11404-201ENSMUST00000120872 494 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm2182-201ENSMUST00000145243 663 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm22555-201ENSMUST00000157801 62 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm22536-201ENSMUST00000158171 134 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm17030-201ENSMUST00000167016 393 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm27883-201ENSMUST00000183941 102 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm27286-201ENSMUST00000184934 179 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm29097-201ENSMUST00000190273 422 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 AC170810.3-201ENSMUST00000226177 374 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 AC166344.2-201ENSMUST00000226747 374 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm24150-201ENSMUST00000082759 104 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm22265-201ENSMUST00000082947 116 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.25□□□□□ -1.73
Msh4Q99MT2 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Msh4Q99MT2 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm14125-201ENSMUST00000113442 680 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm14628-201ENSMUST00000117508 635 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm11268-201ENSMUST00000118347 267 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm13720-201ENSMUST00000120741 196 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm25052-201ENSMUST00000122661 158 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm23023-201ENSMUST00000158767 109 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm17929-201ENSMUST00000186851 627 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm38061-201ENSMUST00000192490 365 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm37641-201ENSMUST00000193837 239 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm44376-201ENSMUST00000197570 128 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm43975-201ENSMUST00000203023 481 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm18414-201ENSMUST00000210858 694 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm45735-201ENSMUST00000212779 319 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 AL935138.1-201ENSMUST00000215309 196 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm24622-201ENSMUST00000082619 162 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm25126-201ENSMUST00000083343 102 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm23733-201ENSMUST00000083750 106 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Msh4Q99MT2 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.24□□□□□ -1.73
Msh4Q99MT2 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.24□□□□□ -1.73
Msh4Q99MT2 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.23□□□□□ -1.73
Msh4Q99MT2 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.23□□□□□ -1.73
Msh4Q99MT2 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Msh4Q99MT2 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms