Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm22988-201ENSMUST00000122759 144 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm18595-201ENSMUST00000175736 1068 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm8641-201ENSMUST00000186995 826 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm17780-201ENSMUST00000207142 612 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm17989-201ENSMUST00000211543 412 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 AC166343.1-201ENSMUST00000213261 577 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 AC160016.1-201ENSMUST00000215589 448 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm18507-201ENSMUST00000218855 525 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm5655-201ENSMUST00000221078 901 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 AC118006.2-201ENSMUST00000224167 962 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm44434-201ENSMUST00000203918 3745 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Gm37965-201ENSMUST00000195304 1362 ntBASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Cdk5rap3Q99LM2 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm13379-201ENSMUST00000118053 621 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm11923-201ENSMUST00000118135 508 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm15195-201ENSMUST00000118775 263 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm5943-201ENSMUST00000119458 459 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm14119-201ENSMUST00000119511 235 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm15387-201ENSMUST00000120421 648 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm12383-201ENSMUST00000120628 760 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm11645-201ENSMUST00000121589 649 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm25713-201ENSMUST00000158625 109 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm24976-201ENSMUST00000158972 135 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm7241-201ENSMUST00000159853 357 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm17655-201ENSMUST00000167969 255 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm37164-201ENSMUST00000192809 637 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm37670-201ENSMUST00000193622 229 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm37088-201ENSMUST00000193887 406 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm43370-201ENSMUST00000196437 284 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm42814-201ENSMUST00000199370 460 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm5175-202ENSMUST00000219699 529 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm26437-201ENSMUST00000082595 105 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm22043-201ENSMUST00000082993 158 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm5518-201ENSMUST00000084171 648 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 BC051076-202ENSMUST00000199477 2868 ntBASIC3.99□□□□□ -1.77
Cdk5rap3Q99LM2 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm23697-201ENSMUST00000103897 110 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm23133-201ENSMUST00000104255 135 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm23178-201ENSMUST00000116782 95 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm14628-201ENSMUST00000117508 635 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm15313-201ENSMUST00000119179 282 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm11718-201ENSMUST00000119942 537 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm6591-201ENSMUST00000121063 434 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm22219-201ENSMUST00000157562 319 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm23312-201ENSMUST00000158774 102 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm3025-201ENSMUST00000163454 489 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm2878-201ENSMUST00000170173 486 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm26556-201ENSMUST00000180645 320 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm27695-201ENSMUST00000184301 91 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm28594-201ENSMUST00000187022 661 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm20776-201ENSMUST00000189940 700 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm43651-201ENSMUST00000199796 439 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Gm19131-201ENSMUST00000203408 789 ntBASIC3.98□□□□□ -1.77
Cdk5rap3Q99LM2 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms