Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm23816-201ENSMUST00000179617 132 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm29105-201ENSMUST00000187256 450 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm29408-201ENSMUST00000187536 216 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm29525-201ENSMUST00000189844 699 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm37698-201ENSMUST00000192605 463 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm37001-201ENSMUST00000193377 190 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Mir129b-201ENSMUST00000197461 65 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm42926-201ENSMUST00000200496 697 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm5885-202ENSMUST00000203357 528 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm45553-201ENSMUST00000209929 507 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm45539-201ENSMUST00000210313 428 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm45796-201ENSMUST00000212483 114 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm5185-201ENSMUST00000080271 619 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Clrn3Q8BHH8 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm11372-201ENSMUST00000117348 570 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm14352-201ENSMUST00000119250 449 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm26362-201ENSMUST00000158865 315 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm16290-201ENSMUST00000161175 474 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm20693-201ENSMUST00000177431 211 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Mir713-201ENSMUST00000178651 108 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm28030-201ENSMUST00000184987 138 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm19774-201ENSMUST00000190667 114 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm29523-201ENSMUST00000191415 699 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Clrn3Q8BHH8 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.4□□□□□ -1.86
Clrn3Q8BHH8 Gm25169-201ENSMUST00000104190 129 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm12982-201ENSMUST00000117408 190 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm11406-201ENSMUST00000117418 484 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm13064-201ENSMUST00000119125 557 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm14687-201ENSMUST00000120206 363 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm15387-201ENSMUST00000120421 648 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm22986-201ENSMUST00000122753 130 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm23782-201ENSMUST00000157939 120 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm22531-201ENSMUST00000158819 140 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Mir3106-201ENSMUST00000175401 82 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm3010-201ENSMUST00000198805 448 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm7204-201ENSMUST00000062591 600 ntBASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clrn3Q8BHH8 Gm5518-201ENSMUST00000084171 648 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms