Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm7164-201ENSMUST00000117503 450 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm7079-201ENSMUST00000119726 171 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm11369-201ENSMUST00000120812 318 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm23213-201ENSMUST00000122715 313 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm24876-201ENSMUST00000158780 92 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm5263-201ENSMUST00000163646 601 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Ubp1Q811S7 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm44063-201ENSMUST00000203307 376 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm2829-201ENSMUST00000213121 499 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 AC134254.5-201ENSMUST00000223436 400 ntBASIC5.5□□□□□ -1.53
Ubp1Q811S7 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Ubp1Q811S7 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm17976-201ENSMUST00000184037 1909 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm14753-201ENSMUST00000118503 246 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm12137-201ENSMUST00000119565 346 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm12732-201ENSMUST00000121688 180 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm25152-201ENSMUST00000157117 114 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm22038-201ENSMUST00000157277 242 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm23233-201ENSMUST00000157301 137 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm3170-201ENSMUST00000168753 850 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Mir5624-201ENSMUST00000176635 61 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm3348-201ENSMUST00000177813 850 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm23725-201ENSMUST00000177876 107 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm26731-201ENSMUST00000180683 543 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm27887-201ENSMUST00000184367 102 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm29509-201ENSMUST00000185716 321 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm28995-201ENSMUST00000186625 261 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm29159-201ENSMUST00000187969 379 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm43393-201ENSMUST00000200147 194 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm19252-201ENSMUST00000204705 305 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm8745-201ENSMUST00000207846 782 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm24045-201ENSMUST00000083113 98 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm44438-201ENSMUST00000204388 3236 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ubp1Q811S7 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.49□□□□□ -1.53
Ubp1Q811S7 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm37096-201ENSMUST00000192317 2058 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm23577-201ENSMUST00000103950 110 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm23294-201ENSMUST00000104150 164 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm11561-201ENSMUST00000117429 417 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm12237-201ENSMUST00000120158 470 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm13991-201ENSMUST00000120190 648 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 n-R5s80-201ENSMUST00000122596 111 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm25489-201ENSMUST00000158727 141 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm23774-201ENSMUST00000158990 131 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.48□□□□□ -1.53
Ubp1Q811S7 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm28625-201ENSMUST00000188309 205 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm36934-201ENSMUST00000192007 306 ntBASIC5.48□□□□□ -1.53
Ubp1Q811S7 Gm9317-201ENSMUST00000197055 862 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms