Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm25139-201ENSMUST00000083247 210 ntBASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Gm25008-201ENSMUST00000083809 81 ntBASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.06□□□□□ -1.6
Cpsf6Q6NVF9 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm24186-201ENSMUST00000157983 127 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm22852-201ENSMUST00000177899 101 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm8600-201ENSMUST00000186320 905 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm44319-201ENSMUST00000196974 93 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm44463-201ENSMUST00000198895 137 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm38670-201ENSMUST00000199248 77 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm7675-201ENSMUST00000208828 686 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm17999-201ENSMUST00000211568 542 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Cpsf6Q6NVF9 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm16089-201ENSMUST00000117679 336 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm14220-201ENSMUST00000118114 449 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm11825-201ENSMUST00000120710 736 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm13214-201ENSMUST00000122137 408 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm25176-201ENSMUST00000122640 125 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm25846-201ENSMUST00000158013 135 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm3076-201ENSMUST00000161613 451 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm17086-201ENSMUST00000171346 484 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Mir3964-201ENSMUST00000174898 74 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm22290-201ENSMUST00000177655 107 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm22583-201ENSMUST00000178031 107 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm18828-202ENSMUST00000181035 310 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm27820-201ENSMUST00000183628 175 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Mir7087-201ENSMUST00000184840 70 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm18177-201ENSMUST00000188373 404 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm9722-201ENSMUST00000194568 802 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm44322-201ENSMUST00000196830 115 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm6543-201ENSMUST00000197353 808 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm42828-201ENSMUST00000199669 469 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Gm19326-201ENSMUST00000219818 326 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cpsf6Q6NVF9 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms