Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Vsx2Q61412 Gm45080-201ENSMUST00000206648 283 ntBASIC3.35□□□□□ -1.87
Vsx2Q61412 Gm18644-201ENSMUST00000211458 815 ntBASIC3.35□□□□□ -1.87
Vsx2Q61412 Gm7639-201ENSMUST00000212608 484 ntBASIC3.35□□□□□ -1.87
Vsx2Q61412 Olfr936-202ENSMUST00000216912 937 ntBASIC3.35□□□□□ -1.87
Vsx2Q61412 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Vsx2Q61412 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.35□□□□□ -1.87
Vsx2Q61412 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Vsx2Q61412 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Vsx2Q61412 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Vsx2Q61412 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.35□□□□□ -1.87
Vsx2Q61412 Mir323-201ENSMUST00000083683 86 ntBASIC3.35□□□□□ -1.87
Vsx2Q61412 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Vsx2Q61412 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Vsx2Q61412 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Vsx2Q61412 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Vsx2Q61412 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Vsx2Q61412 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Vsx2Q61412 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Vsx2Q61412 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Vsx2Q61412 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Vsx2Q61412 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm26145-201ENSMUST00000104476 127 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm13076-201ENSMUST00000118041 204 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm15060-201ENSMUST00000119550 948 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm13460-201ENSMUST00000121274 353 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm13009-201ENSMUST00000121307 267 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.34□□□□□ -1.87
Vsx2Q61412 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm22034-201ENSMUST00000157283 134 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm24553-201ENSMUST00000158653 131 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm25977-201ENSMUST00000158697 85 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm9890-201ENSMUST00000171867 537 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm28196-201ENSMUST00000187719 640 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm7182-201ENSMUST00000193351 732 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm43975-201ENSMUST00000203023 481 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm45574-201ENSMUST00000210921 331 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm36247-201ENSMUST00000211834 285 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.34□□□□□ -1.87
Vsx2Q61412 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm25630-201ENSMUST00000084000 162 ntBASIC3.34□□□□□ -1.87
Vsx2Q61412 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Vsx2Q61412 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Vsx2Q61412 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Vsx2Q61412 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Vsx2Q61412 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Vsx2Q61412 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
Vsx2Q61412 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Vsx2Q61412 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm14811-201ENSMUST00000117070 117 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm14739-201ENSMUST00000120424 802 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm25572-201ENSMUST00000157527 172 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm18604-201ENSMUST00000172535 558 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Mir5127-201ENSMUST00000175295 71 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Vsx2Q61412 Mir6408-201ENSMUST00000183643 91 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.33□□□□□ -1.88
Vsx2Q61412 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm18747-201ENSMUST00000198129 648 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm18871-201ENSMUST00000218655 745 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm21007-201ENSMUST00000221024 326 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Vsx2Q61412 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
Vsx2Q61412 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Vsx2Q61412 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Vsx2Q61412 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.33□□□□□ -1.88
Vsx2Q61412 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Vsx2Q61412 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Vsx2Q61412 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm23256-201ENSMUST00000102235 110 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm26140-201ENSMUST00000103807 110 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm12858-201ENSMUST00000121913 208 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm25967-201ENSMUST00000157168 147 ntBASIC3.32□□□□□ -1.88
Vsx2Q61412 Gm24008-201ENSMUST00000157733 138 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms