Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 AC124746.1-201ENSMUST00000227535 1300 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CtcfQ61164 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CtcfQ61164 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm16400-201ENSMUST00000116523 1029 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Gm13607-201ENSMUST00000117875 539 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Gm12564-201ENSMUST00000119860 321 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CtcfQ61164 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm3221-201ENSMUST00000164869 440 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Gm24080-201ENSMUST00000175178 232 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
CtcfQ61164 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC4.51□□□□□ -1.69
CtcfQ61164 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm18181-201ENSMUST00000190670 736 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Gm37288-201ENSMUST00000193963 334 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Gm38098-201ENSMUST00000194115 241 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm43214-201ENSMUST00000199242 352 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm43979-201ENSMUST00000203179 475 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm44135-201ENSMUST00000205221 368 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.51□□□□□ -1.69
CtcfQ61164 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm7093-201ENSMUST00000223004 581 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 CT009550.5-201ENSMUST00000226286 382 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CtcfQ61164 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CtcfQ61164 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CtcfQ61164 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CtcfQ61164 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm20679-201ENSMUST00000177285 1402 ntBASIC4.51□□□□□ -1.69
CtcfQ61164 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CtcfQ61164 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CtcfQ61164 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CtcfQ61164 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CtcfQ61164 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CtcfQ61164 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CtcfQ61164 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CtcfQ61164 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
CtcfQ61164 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
CtcfQ61164 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CtcfQ61164 Gm10552-201ENSMUST00000113396 372 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm14945-201ENSMUST00000119556 1118 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm12884-201ENSMUST00000120371 325 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm14591-201ENSMUST00000120407 518 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm16458-201ENSMUST00000121428 502 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm22478-201ENSMUST00000122570 154 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm22453-201ENSMUST00000122801 318 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.5□□□□□ -1.69
CtcfQ61164 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.5□□□□□ -1.69
CtcfQ61164 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC4.5□□□□□ -1.69
CtcfQ61164 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.5□□□□□ -1.69
CtcfQ61164 Gm23585-201ENSMUST00000157656 102 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm24211-201ENSMUST00000158264 107 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CtcfQ61164 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CtcfQ61164 Gm23145-201ENSMUST00000178912 79 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm27308-201ENSMUST00000184807 233 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC4.5□□□□□ -1.69
CtcfQ61164 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm45735-201ENSMUST00000212779 319 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CtcfQ61164 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 AC162857.1-201ENSMUST00000226614 400 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 AC150560.3-201ENSMUST00000227442 455 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 AC107453.2-201ENSMUST00000227714 655 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CtcfQ61164 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CtcfQ61164 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CtcfQ61164 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
CtcfQ61164 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CtcfQ61164 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.5□□□□□ -1.69
CtcfQ61164 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CtcfQ61164 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CtcfQ61164 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CtcfQ61164 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
CtcfQ61164 Gm23322-201ENSMUST00000104464 167 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CtcfQ61164 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.49□□□□□ -1.69
CtcfQ61164 Gm14577-201ENSMUST00000121134 256 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms