Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm14576-201ENSMUST00000118073 1111 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm23668-201ENSMUST00000157465 111 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm26993-201ENSMUST00000182766 789 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm27538-201ENSMUST00000185065 294 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm43227-201ENSMUST00000202239 677 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm19039-201ENSMUST00000204363 575 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm18363-201ENSMUST00000221671 730 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm26129-201ENSMUST00000082719 107 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm22141-201ENSMUST00000157403 277 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm27160-201ENSMUST00000184837 199 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm37490-201ENSMUST00000195566 724 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm19232-201ENSMUST00000211621 652 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm19181-201ENSMUST00000218891 940 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc88aQ5SNZ0 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm24787-201ENSMUST00000157380 123 ntBASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm25456-201ENSMUST00000157952 109 ntBASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Trbv10-201ENSMUST00000168322 289 ntBASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Mir6413-201ENSMUST00000184049 108 ntBASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm27308-201ENSMUST00000184807 233 ntBASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm32222-201ENSMUST00000203296 298 ntBASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 AC122295.1-201ENSMUST00000223476 388 ntBASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Snord14e-201ENSMUST00000082857 90 ntBASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm22378-201ENSMUST00000157481 111 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm4222-201ENSMUST00000165784 470 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm44343-201ENSMUST00000196702 90 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr192-201ENSMUST00000080251 925 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm12001-201ENSMUST00000121727 913 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm20561-201ENSMUST00000188131 292 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm25581-201ENSMUST00000083410 164 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc88aQ5SNZ0 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm13122-201ENSMUST00000118380 453 ntBASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm14901-201ENSMUST00000119001 283 ntBASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm14570-201ENSMUST00000119444 391 ntBASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm28149-201ENSMUST00000187102 378 ntBASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm28768-201ENSMUST00000189034 378 ntBASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm28803-201ENSMUST00000190385 764 ntBASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm45733-201ENSMUST00000212988 437 ntBASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm35405-201ENSMUST00000218754 400 ntBASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc88aQ5SNZ0 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms