Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Gm29084-201ENSMUST00000185587 1452 ntBASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Gm11633-201ENSMUST00000118176 444 ntBASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Gm14577-201ENSMUST00000121134 256 ntBASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Gm3027-201ENSMUST00000167579 451 ntBASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Gm3104-201ENSMUST00000171004 473 ntBASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Gm23523-201ENSMUST00000180190 107 ntBASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 AC109180.1-201ENSMUST00000218676 398 ntBASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 AC125405.1-201ENSMUST00000226406 589 ntBASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Gm38307-201ENSMUST00000195630 1840 ntBASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Gm38257-201ENSMUST00000195881 2761 ntBASIC9.56□□□□□ -0.88
Trim41Q5NCC3 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim41Q5NCC3 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm38372-201ENSMUST00000194854 4028 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm37079-201ENSMUST00000194114 2135 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm37311-201ENSMUST00000195541 2024 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm26146-201ENSMUST00000104478 185 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm15986-201ENSMUST00000122153 400 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm22290-201ENSMUST00000177655 107 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm22583-201ENSMUST00000178031 107 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm23402-201ENSMUST00000178130 107 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm26189-201ENSMUST00000179879 107 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm22263-201ENSMUST00000180060 104 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Mir6401-201ENSMUST00000184499 109 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 AC142273.1-201ENSMUST00000213723 673 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm29785-201ENSMUST00000217033 383 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 AC137961.1-201ENSMUST00000227924 734 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 n-R5s88-201ENSMUST00000083173 118 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 AL591843.1-201ENSMUST00000223686 3082 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm7709-201ENSMUST00000199391 1858 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm37248-201ENSMUST00000193576 3174 ntBASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
Trim41Q5NCC3 Gm13712-201ENSMUST00000117484 2295 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 AC120375.1-201ENSMUST00000227034 3612 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm14287-201ENSMUST00000121060 117 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm25106-201ENSMUST00000122672 134 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm26352-201ENSMUST00000158223 125 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm25920-201ENSMUST00000158307 99 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm17162-201ENSMUST00000168538 473 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Mir6960-201ENSMUST00000183449 61 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm28683-201ENSMUST00000187134 615 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm23925-202ENSMUST00000188429 132 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm28840-205ENSMUST00000189320 615 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm28835-203ENSMUST00000190062 615 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm26228-201ENSMUST00000082512 107 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm25080-201ENSMUST00000082526 107 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm25126-201ENSMUST00000083343 102 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm25518-201ENSMUST00000083864 107 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm19131-202ENSMUST00000203464 3208 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Gm4011-201ENSMUST00000174657 2555 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim41Q5NCC3 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Fam35a-206ENSMUST00000228626 3100 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm45426-201ENSMUST00000209393 3672 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm14669-201ENSMUST00000118841 250 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm14874-201ENSMUST00000118995 438 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm14831-201ENSMUST00000120253 409 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm26170-201ENSMUST00000158419 148 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm17020-201ENSMUST00000172274 274 ntBASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim41Q5NCC3 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms