Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 CT030704.1-201ENSMUST00000227521 699 ntBASIC5.28□□□□□ -1.56
Ccdc88bQ4QRL3 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc88bQ4QRL3 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc88bQ4QRL3 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc88bQ4QRL3 Gm36951-201ENSMUST00000193840 2687 ntBASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 Gm8995-201ENSMUST00000184842 7280 ntBASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 Gm5392-201ENSMUST00000122189 789 ntBASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 Gm26477-201ENSMUST00000122617 323 ntBASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 n-R5s30-201ENSMUST00000122624 122 ntBASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 Gm22187-201ENSMUST00000157819 129 ntBASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Ccdc88bQ4QRL3 Gm11321-201ENSMUST00000121257 902 ntBASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Gm22864-201ENSMUST00000083950 130 ntBASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Gm24720-201ENSMUST00000157518 166 ntBASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Gm26297-201ENSMUST00000179464 132 ntBASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Gm28118-201ENSMUST00000185957 294 ntBASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88bQ4QRL3 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Gm37848-201ENSMUST00000195288 3103 ntBASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Gm7071-201ENSMUST00000120458 462 ntBASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Gm24691-201ENSMUST00000157762 140 ntBASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Mir3470b-201ENSMUST00000175563 126 ntBASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Mir3965-201ENSMUST00000175570 69 ntBASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Gm28141-201ENSMUST00000186676 342 ntBASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Amd-ps5-201ENSMUST00000198406 989 ntBASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Gm44253-201ENSMUST00000203387 628 ntBASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Gm26449-201ENSMUST00000082452 104 ntBASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc88bQ4QRL3 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Gm22939-201ENSMUST00000103958 131 ntBASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Gm13504-201ENSMUST00000117490 316 ntBASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Gm13581-201ENSMUST00000120675 278 ntBASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Gm22532-201ENSMUST00000158822 140 ntBASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Gm42593-201ENSMUST00000198469 377 ntBASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Gm7652-201ENSMUST00000200440 1151 ntBASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Gm45269-201ENSMUST00000210359 282 ntBASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Snora31-201ENSMUST00000083213 130 ntBASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ccdc88bQ4QRL3 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88bQ4QRL3 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.23□□□□□ -1.57
Ccdc88bQ4QRL3 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ccdc88bQ4QRL3 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Ccdc88bQ4QRL3 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Ccdc88bQ4QRL3 Gm18486-201ENSMUST00000184040 298 ntBASIC5.23□□□□□ -1.57
Ccdc88bQ4QRL3 Gm28967-201ENSMUST00000187351 281 ntBASIC5.23□□□□□ -1.57
Ccdc88bQ4QRL3 Gm24350-202ENSMUST00000198309 132 ntBASIC5.23□□□□□ -1.57
Ccdc88bQ4QRL3 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC5.23□□□□□ -1.57
Ccdc88bQ4QRL3 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Ccdc88bQ4QRL3 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Gm42585-201ENSMUST00000198731 4020 ntBASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Gm14890-201ENSMUST00000117660 676 ntBASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Gm14987-201ENSMUST00000117820 676 ntBASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Gm13121-201ENSMUST00000120637 632 ntBASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Gm24190-201ENSMUST00000157976 216 ntBASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Gm2427-201ENSMUST00000189121 881 ntBASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Gm37966-201ENSMUST00000193122 326 ntBASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Gm18441-201ENSMUST00000223539 617 ntBASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 AC140451.2-202ENSMUST00000226156 574 ntBASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Gm6195-201ENSMUST00000063059 357 ntBASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ccdc88bQ4QRL3 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Ccdc88bQ4QRL3 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Gm13122-201ENSMUST00000118380 453 ntBASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Gm12387-201ENSMUST00000118573 955 ntBASIC5.21□□□□□ -1.58
Ccdc88bQ4QRL3 Gm13438-201ENSMUST00000120100 573 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms