Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm24965-201ENSMUST00000157922 106 ntBASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm22764-201ENSMUST00000158370 92 ntBASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Mir6238-201ENSMUST00000184140 129 ntBASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm29064-201ENSMUST00000187014 813 ntBASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm28069-201ENSMUST00000189926 214 ntBASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm18900-201ENSMUST00000193218 584 ntBASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm7946-201ENSMUST00000203326 958 ntBASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Upf3aQ3ULJ3 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm14811-201ENSMUST00000117070 117 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm14786-201ENSMUST00000117127 944 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm13607-201ENSMUST00000117875 539 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm13460-201ENSMUST00000121274 353 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm12412-201ENSMUST00000121867 328 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm26254-201ENSMUST00000122491 118 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm24936-201ENSMUST00000122598 247 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm22034-201ENSMUST00000157283 134 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm25520-201ENSMUST00000158389 118 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm4540-201ENSMUST00000170669 429 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Mir6993-201ENSMUST00000184912 65 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm29747-201ENSMUST00000194764 585 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm43308-201ENSMUST00000197236 373 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm20177-201ENSMUST00000203705 334 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm34005-201ENSMUST00000215834 282 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm19599-201ENSMUST00000218898 358 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 AC139294.2-201ENSMUST00000227159 285 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Snord35b-201ENSMUST00000082833 87 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Upf3aQ3ULJ3 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm12982-201ENSMUST00000117408 190 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm12025-201ENSMUST00000117768 144 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm11923-201ENSMUST00000118135 508 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm12722-201ENSMUST00000118507 493 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm7846-201ENSMUST00000145844 274 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Gm23591-201ENSMUST00000157663 286 ntBASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
Upf3aQ3ULJ3 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms