Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm11262-201ENSMUST00000119326 833 ntBASIC3.03□□□□□ -1.92
Spg11Q3UHA3 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC3.03□□□□□ -1.92
Spg11Q3UHA3 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.03□□□□□ -1.92
Spg11Q3UHA3 Gm23753-201ENSMUST00000157575 149 ntBASIC3.03□□□□□ -1.92
Spg11Q3UHA3 Gm24402-201ENSMUST00000157873 91 ntBASIC3.03□□□□□ -1.92
Spg11Q3UHA3 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Spg11Q3UHA3 Gm37741-201ENSMUST00000191768 1256 ntBASIC3.03□□□□□ -1.92
Spg11Q3UHA3 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Spg11Q3UHA3 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.03□□□□□ -1.92
Spg11Q3UHA3 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Spg11Q3UHA3 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.93
Spg11Q3UHA3 Gm22141-201ENSMUST00000157403 277 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm23121-201ENSMUST00000157653 173 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm25069-201ENSMUST00000175238 86 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm24816-201ENSMUST00000175311 151 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21842-201ENSMUST00000177552 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21626-201ENSMUST00000177791 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21562-201ENSMUST00000177888 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21539-201ENSMUST00000177925 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm17522-201ENSMUST00000178144 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21599-201ENSMUST00000178249 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21914-201ENSMUST00000178452 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21723-201ENSMUST00000178692 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21916-201ENSMUST00000178771 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21801-201ENSMUST00000178865 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21633-201ENSMUST00000178941 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm17412-201ENSMUST00000179261 468 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21821-201ENSMUST00000179646 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21588-201ENSMUST00000180074 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21780-201ENSMUST00000180128 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21572-201ENSMUST00000180134 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm21529-201ENSMUST00000180175 498 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm29370-202ENSMUST00000187476 499 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Olfr192-201ENSMUST00000080251 925 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm24274-201ENSMUST00000116787 124 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm14843-201ENSMUST00000119596 212 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm5396-201ENSMUST00000121222 532 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm25153-201ENSMUST00000157118 156 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm43765-201ENSMUST00000196303 893 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm43600-201ENSMUST00000202134 223 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm45733-201ENSMUST00000212988 437 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm24698-201ENSMUST00000083883 130 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.02□□□□□ -1.93
Spg11Q3UHA3 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm12878-201ENSMUST00000118744 332 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm13717-201ENSMUST00000119868 365 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm43992-201ENSMUST00000204358 197 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm8209-201ENSMUST00000206386 553 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm4017-201ENSMUST00000084813 338 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm15844-201ENSMUST00000118016 576 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm20574-201ENSMUST00000182867 917 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm37353-201ENSMUST00000194497 313 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm44582-201ENSMUST00000209125 445 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm45551-201ENSMUST00000211459 928 ntBASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Spg11Q3UHA3 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3□□□□□ -1.93
Spg11Q3UHA3 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC3□□□□□ -1.93
Spg11Q3UHA3 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3□□□□□ -1.93
Spg11Q3UHA3 Gm24436-201ENSMUST00000157889 302 ntBASIC3□□□□□ -1.93
Spg11Q3UHA3 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3□□□□□ -1.93
Spg11Q3UHA3 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms