Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm23424-201ENSMUST00000103889 110 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm15783-201ENSMUST00000117521 633 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm15001-201ENSMUST00000117657 795 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm12578-201ENSMUST00000121244 417 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm11982-201ENSMUST00000121480 314 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm14383-201ENSMUST00000121637 386 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm25295-201ENSMUST00000122794 306 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm24244-201ENSMUST00000157317 130 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm26187-201ENSMUST00000157693 101 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm17194-201ENSMUST00000164610 348 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm22693-201ENSMUST00000175049 442 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm7634-201ENSMUST00000185778 553 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm28598-201ENSMUST00000186490 615 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm29268-201ENSMUST00000188669 615 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm29218-205ENSMUST00000190846 615 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm28978-201ENSMUST00000191120 615 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm37172-201ENSMUST00000191926 615 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm37603-201ENSMUST00000192368 219 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm38356-201ENSMUST00000194313 408 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm9722-201ENSMUST00000194568 802 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm37989-201ENSMUST00000195202 803 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm37575-201ENSMUST00000195467 309 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Trav12-4-201ENSMUST00000200663 271 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm44475-201ENSMUST00000204041 424 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm20948-201ENSMUST00000211091 449 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm23846-201ENSMUST00000083835 107 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Snord15a-201ENSMUST00000083888 148 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Trafd1Q3UDK1 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm25765-201ENSMUST00000104100 132 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm11408-201ENSMUST00000117889 519 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm12335-201ENSMUST00000119738 327 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm13059-201ENSMUST00000119881 398 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm15387-201ENSMUST00000120421 648 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm12693-201ENSMUST00000121965 483 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm16129-201ENSMUST00000152628 486 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm23205-201ENSMUST00000158671 103 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm25369-201ENSMUST00000158848 132 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm25026-201ENSMUST00000175017 188 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm25120-201ENSMUST00000180148 79 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm6140-201ENSMUST00000192494 966 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm37164-201ENSMUST00000192809 637 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm37001-201ENSMUST00000193377 190 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Gm43814-201ENSMUST00000197851 413 ntBASIC3.62□□□□□ -1.83
Trafd1Q3UDK1 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 141.4 ms