Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm12044-201ENSMUST00000120335 213 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm22314-201ENSMUST00000158007 281 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm18448-201ENSMUST00000186286 599 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm42451-201ENSMUST00000197410 244 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm44118-201ENSMUST00000204665 229 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 AC131677.1-201ENSMUST00000218721 535 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 AC123062.1-201ENSMUST00000221287 481 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 AC139845.2-201ENSMUST00000227504 436 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm7117-201ENSMUST00000071515 387 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm23443-201ENSMUST00000082916 128 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Mir34b-201ENSMUST00000083558 84 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm23424-201ENSMUST00000103889 110 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm11742-201ENSMUST00000119903 233 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm10059-201ENSMUST00000131139 171 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm26148-201ENSMUST00000157430 68 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm23391-201ENSMUST00000157579 104 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm29452-201ENSMUST00000187996 313 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm28860-201ENSMUST00000188103 313 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm6261-201ENSMUST00000204707 760 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm17829-201ENSMUST00000219782 344 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 AC107453.2-201ENSMUST00000227714 655 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC5.42□□□□□ -1.54
Ddb1Q3U1J4 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm26002-201ENSMUST00000101915 107 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm24715-201ENSMUST00000102377 95 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm22591-201ENSMUST00000104243 106 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm14677-201ENSMUST00000117866 486 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm15988-201ENSMUST00000118677 367 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm23168-201ENSMUST00000157156 143 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm29550-201ENSMUST00000185543 285 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm28314-201ENSMUST00000191276 345 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm37104-201ENSMUST00000193278 196 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm43675-201ENSMUST00000199468 1184 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm31230-201ENSMUST00000199725 785 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm44254-201ENSMUST00000204184 322 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ddb1Q3U1J4 Gm18026-201ENSMUST00000222789 727 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms