Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Mir667-201ENSMUST00000102441 92 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm22899-201ENSMUST00000104540 131 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm25103-201ENSMUST00000122671 318 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm24304-201ENSMUST00000177635 107 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Mir466b-1-201ENSMUST00000177988 82 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm24487-201ENSMUST00000178017 63 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm43250-201ENSMUST00000196536 273 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm43583-201ENSMUST00000199235 303 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm5735-201ENSMUST00000207053 167 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm10709-201ENSMUST00000213318 480 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm6068-201ENSMUST00000222270 387 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm8744-201ENSMUST00000204475 3581 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 AC126673.3-201ENSMUST00000223414 3829 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm12494-201ENSMUST00000121684 521 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm11506-201ENSMUST00000122414 470 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm22613-201ENSMUST00000122679 292 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm23276-201ENSMUST00000157913 138 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm27510-201ENSMUST00000158214 64 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm25015-201ENSMUST00000158400 128 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm25203-202ENSMUST00000200458 216 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm45772-201ENSMUST00000212961 240 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 AC074315.1-201ENSMUST00000228801 214 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm25203-201ENSMUST00000082842 215 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm37180-201ENSMUST00000195335 2819 ntBASIC6.07□□□□□ -1.44
Col9a1Q05722 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Col9a1Q05722 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col9a1Q05722 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Col9a1Q05722 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.06□□□□□ -1.44
Col9a1Q05722 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.06□□□□□ -1.44
Col9a1Q05722 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Col9a1Q05722 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col9a1Q05722 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms