Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 AC115289.1-201ENSMUST00000224915 522 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 AV026068-237ENSMUST00000226075 572 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col8a1Q00780 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col8a1Q00780 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC4.47□□□□□ -1.69
Col8a1Q00780 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col8a1Q00780 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm37833-201ENSMUST00000194342 3256 ntBASIC4.47□□□□□ -1.69
Col8a1Q00780 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col8a1Q00780 Gm19514-201ENSMUST00000206856 4489 ntBASIC4.46□□□□□ -1.69
Col8a1Q00780 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.46□□□□□ -1.69
Col8a1Q00780 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.46□□□□□ -1.69
Col8a1Q00780 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
Col8a1Q00780 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
Col8a1Q00780 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Col8a1Q00780 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
Col8a1Q00780 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Col8a1Q00780 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Col8a1Q00780 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col8a1Q00780 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
Col8a1Q00780 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC4.46□□□□□ -1.7
Col8a1Q00780 AC102369.2-201ENSMUST00000219725 1679 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm12765-201ENSMUST00000117273 615 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm7164-201ENSMUST00000117503 450 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm14628-201ENSMUST00000117508 635 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col8a1Q00780 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm25339-201ENSMUST00000157458 232 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm22646-201ENSMUST00000175130 115 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm27266-201ENSMUST00000184521 123 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm29524-201ENSMUST00000190819 699 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm28098-201ENSMUST00000191361 699 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm6105-201ENSMUST00000200580 624 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm19196-201ENSMUST00000209258 357 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm19096-201ENSMUST00000209705 766 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm45439-201ENSMUST00000211723 359 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm46327-201ENSMUST00000218240 365 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col8a1Q00780 Olfr151-202ENSMUST00000221099 929 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col8a1Q00780 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm26225-201ENSMUST00000082508 135 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col8a1Q00780 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col8a1Q00780 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.46□□□□□ -1.7
Col8a1Q00780 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col8a1Q00780 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Col8a1Q00780 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col8a1Q00780 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.46□□□□□ -1.7
Col8a1Q00780 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col8a1Q00780 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col8a1Q00780 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm45493-201ENSMUST00000209494 3948 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm44751-201ENSMUST00000208302 4387 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm22899-201ENSMUST00000104540 131 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm14304-201ENSMUST00000117272 446 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm8145-201ENSMUST00000118220 745 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm12053-201ENSMUST00000119022 252 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm13064-201ENSMUST00000119125 557 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm15106-201ENSMUST00000119691 821 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm24836-201ENSMUST00000122609 108 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm3362-201ENSMUST00000148102 466 ntBASIC4.45□□□□□ -1.7
Col8a1Q00780 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col8a1Q00780 Gm22160-201ENSMUST00000158405 328 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms