Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Snord7-201ENSMUST00000083781 97 ntBASIC4.83□□□□□ -1.64
Cux1P53564 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cux1P53564 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cux1P53564 Gm9314-201ENSMUST00000199881 1528 ntBASIC4.83□□□□□ -1.64
Cux1P53564 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC4.83□□□□□ -1.64
Cux1P53564 Gm14667-201ENSMUST00000119448 1350 ntBASIC4.83□□□□□ -1.64
Cux1P53564 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cux1P53564 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cux1P53564 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Cux1P53564 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cux1P53564 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cux1P53564 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.82□□□□□ -1.64
Cux1P53564 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cux1P53564 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cux1P53564 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cux1P53564 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cux1P53564 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cux1P53564 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cux1P53564 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.82□□□□□ -1.64
Cux1P53564 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cux1P53564 Gm43753-201ENSMUST00000196539 3309 ntBASIC4.82□□□□□ -1.64
Cux1P53564 Gm37056-201ENSMUST00000192141 1865 ntBASIC4.82□□□□□ -1.64
Cux1P53564 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cux1P53564 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cux1P53564 Mir1195-201ENSMUST00000116818 98 ntBASIC4.82□□□□□ -1.64
Cux1P53564 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC4.82□□□□□ -1.64
Cux1P53564 Gm13122-201ENSMUST00000118380 453 ntBASIC4.82□□□□□ -1.64
Cux1P53564 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.82□□□□□ -1.64
Cux1P53564 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.82□□□□□ -1.64
Cux1P53564 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.82□□□□□ -1.64
Cux1P53564 Gm44376-201ENSMUST00000197570 128 ntBASIC4.82□□□□□ -1.64
Cux1P53564 Gm44320-201ENSMUST00000199276 86 ntBASIC4.82□□□□□ -1.64
Cux1P53564 Gm6649-201ENSMUST00000199743 1165 ntBASIC4.82□□□□□ -1.64
Cux1P53564 Gm18997-201ENSMUST00000216353 822 ntBASIC4.82□□□□□ -1.64
Cux1P53564 AC122924.1-201ENSMUST00000222044 163 ntBASIC4.82□□□□□ -1.64
Cux1P53564 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cux1P53564 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cux1P53564 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cux1P53564 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.81□□□□□ -1.64
Cux1P53564 AC132336.1-201ENSMUST00000222844 1740 ntBASIC4.81□□□□□ -1.64
Cux1P53564 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cux1P53564 Gm42684-201ENSMUST00000197663 3615 ntBASIC4.81□□□□□ -1.64
Cux1P53564 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cux1P53564 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Cux1P53564 Gm7853-201ENSMUST00000100708 478 ntBASIC4.81□□□□□ -1.64
Cux1P53564 Gm16216-201ENSMUST00000118970 1111 ntBASIC4.81□□□□□ -1.64
Cux1P53564 Gm24958-201ENSMUST00000158009 97 ntBASIC4.81□□□□□ -1.64
Cux1P53564 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC4.81□□□□□ -1.64
Cux1P53564 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cux1P53564 Gm37490-201ENSMUST00000195566 724 ntBASIC4.81□□□□□ -1.64
Cux1P53564 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC4.81□□□□□ -1.64
Cux1P53564 Gm43892-201ENSMUST00000204373 265 ntBASIC4.81□□□□□ -1.64
Cux1P53564 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cux1P53564 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cux1P53564 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cux1P53564 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Cux1P53564 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.8□□□□□ -1.64
Cux1P53564 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.8□□□□□ -1.64
Cux1P53564 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cux1P53564 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cux1P53564 Gm23577-201ENSMUST00000103950 110 ntBASIC4.8□□□□□ -1.64
Cux1P53564 Gm14518-201ENSMUST00000117351 542 ntBASIC4.8□□□□□ -1.64
Cux1P53564 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cux1P53564 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cux1P53564 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.8□□□□□ -1.64
Cux1P53564 Gm26028-201ENSMUST00000158660 294 ntBASIC4.8□□□□□ -1.64
Cux1P53564 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.8□□□□□ -1.64
Cux1P53564 Mir6401-201ENSMUST00000184499 109 ntBASIC4.8□□□□□ -1.64
Cux1P53564 Gm5176-202ENSMUST00000220267 583 ntBASIC4.8□□□□□ -1.64
Cux1P53564 Gm4057-201ENSMUST00000221407 368 ntBASIC4.8□□□□□ -1.64
Cux1P53564 AC155305.1-201ENSMUST00000222207 319 ntBASIC4.8□□□□□ -1.64
Cux1P53564 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.8□□□□□ -1.64
Cux1P53564 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cux1P53564 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cux1P53564 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Cux1P53564 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cux1P53564 Gm44150-201ENSMUST00000203317 2619 ntBASIC4.79□□□□□ -1.64
Cux1P53564 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.79□□□□□ -1.64
Cux1P53564 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.79□□□□□ -1.64
Cux1P53564 Gm38090-201ENSMUST00000195733 1942 ntBASIC4.79□□□□□ -1.64
Cux1P53564 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cux1P53564 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cux1P53564 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Cux1P53564 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cux1P53564 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cux1P53564 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cux1P53564 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cux1P53564 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Cux1P53564 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cux1P53564 Gm14981-201ENSMUST00000117325 943 ntBASIC4.78□□□□□ -1.64
Cux1P53564 Gm11881-201ENSMUST00000119408 572 ntBASIC4.78□□□□□ -1.64
Cux1P53564 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cux1P53564 Gm45246-201ENSMUST00000210820 367 ntBASIC4.78□□□□□ -1.64
Cux1P53564 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cux1P53564 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cux1P53564 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cux1P53564 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cux1P53564 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cux1P53564 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cux1P53564 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms