Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Rfx1P48377 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC6.03□□□□□ -1.44
Rfx1P48377 Mir7220-201ENSMUST00000183978 60 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 Mir6363-201ENSMUST00000184880 114 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC6.03□□□□□ -1.44
Rfx1P48377 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Rfx1P48377 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.03□□□□□ -1.44
Rfx1P48377 Gm44609-201ENSMUST00000207157 460 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 Gm45735-201ENSMUST00000212779 319 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Rfx1P48377 AC113031.3-201ENSMUST00000226552 190 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 AC144819.1-201ENSMUST00000227015 620 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 AC165106.3-201ENSMUST00000228191 3843 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Rfx1P48377 AC103672.3-201ENSMUST00000227649 3243 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 Gm43312-201ENSMUST00000201655 2466 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rfx1P48377 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Rfx1P48377 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Rfx1P48377 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC6.02□□□□□ -1.45
Rfx1P48377 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx1P48377 Mir667-201ENSMUST00000102441 92 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm12568-201ENSMUST00000117362 624 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm14681-201ENSMUST00000118047 411 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm15012-201ENSMUST00000119176 106 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm14619-201ENSMUST00000120480 168 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm12422-201ENSMUST00000121431 302 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm25827-201ENSMUST00000157089 107 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm23312-201ENSMUST00000158774 102 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm20401-201ENSMUST00000173717 212 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm20545-201ENSMUST00000174739 210 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm28615-201ENSMUST00000187527 482 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm28069-201ENSMUST00000189926 214 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm43669-201ENSMUST00000198229 436 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx1P48377 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm4510-201ENSMUST00000218265 427 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm20102-201ENSMUST00000222445 220 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm8526-201ENSMUST00000079153 475 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm25134-201ENSMUST00000082646 160 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm22126-201ENSMUST00000083244 142 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Mir298-201ENSMUST00000083476 82 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Rfx1P48377 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Rfx1P48377 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Rfx1P48377 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Gm45222-201ENSMUST00000207029 4307 ntBASIC6.02□□□□□ -1.45
Rfx1P48377 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx1P48377 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx1P48377 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx1P48377 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx1P48377 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx1P48377 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx1P48377 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Rfx1P48377 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Rfx1P48377 Gm11221-201ENSMUST00000117230 597 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 Gm15490-201ENSMUST00000119894 387 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx1P48377 Gm23499-201ENSMUST00000157736 268 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 Gm8816-201ENSMUST00000182280 1163 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC6.01□□□□□ -1.45
Rfx1P48377 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx1P48377 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC6.01□□□□□ -1.45
Rfx1P48377 Gm32447-201ENSMUST00000194265 697 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC6.01□□□□□ -1.45
Rfx1P48377 Gm43215-201ENSMUST00000199108 252 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 Gm44468-201ENSMUST00000199516 105 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Rfx1P48377 Gm43945-201ENSMUST00000203595 754 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC6.01□□□□□ -1.45
Rfx1P48377 AC157515.1-201ENSMUST00000220953 450 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 n-R5s50-201ENSMUST00000083168 111 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Rfx1P48377 Gm43527-201ENSMUST00000198749 3178 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx1P48377 Gm38243-201ENSMUST00000194737 1567 ntBASIC6.01□□□□□ -1.45
Rfx1P48377 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC6.01□□□□□ -1.45
Rfx1P48377 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx1P48377 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx1P48377 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx1P48377 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Rfx1P48377 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Rfx1P48377 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6□□□□□ -1.45
Rfx1P48377 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Rfx1P48377 Gm18852-201ENSMUST00000184149 3593 ntBASIC6□□□□□ -1.45
Rfx1P48377 Gm6162-201ENSMUST00000194870 2930 ntBASIC6□□□□□ -1.45
Rfx1P48377 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 140 ms