Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC3.26□□□□□ -1.89
HttP42859 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HttP42859 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HttP42859 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HttP42859 Gm16274-201ENSMUST00000139251 592 ntBASIC3.26□□□□□ -1.89
HttP42859 Gm16584-201ENSMUST00000159267 189 ntBASIC3.26□□□□□ -1.89
HttP42859 Gm17166-201ENSMUST00000172006 431 ntBASIC3.26□□□□□ -1.89
HttP42859 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.26□□□□□ -1.89
HttP42859 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3.26□□□□□ -1.89
HttP42859 Mir6386-201ENSMUST00000183558 104 ntBASIC3.26□□□□□ -1.89
HttP42859 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HttP42859 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HttP42859 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HttP42859 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
HttP42859 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HttP42859 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HttP42859 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HttP42859 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HttP42859 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HttP42859 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HttP42859 Gm22600-201ENSMUST00000157598 269 ntBASIC3.26□□□□□ -1.89
HttP42859 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC3.26□□□□□ -1.89
HttP42859 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC3.26□□□□□ -1.89
HttP42859 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HttP42859 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HttP42859 Gm43696-201ENSMUST00000199385 6071 ntBASIC3.25□□□□□ -1.89
HttP42859 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HttP42859 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
HttP42859 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
HttP42859 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HttP42859 Gm24907-201ENSMUST00000116932 128 ntBASIC3.25□□□□□ -1.89
HttP42859 DQ267100-201ENSMUST00000122600 72 ntBASIC3.25□□□□□ -1.89
HttP42859 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.25□□□□□ -1.89
HttP42859 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.25□□□□□ -1.89
HttP42859 Gm44623-201ENSMUST00000207934 434 ntBASIC3.25□□□□□ -1.89
HttP42859 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HttP42859 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HttP42859 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HttP42859 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
HttP42859 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HttP42859 Gm23128-201ENSMUST00000104257 132 ntBASIC3.25□□□□□ -1.89
HttP42859 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.25□□□□□ -1.89
HttP42859 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.25□□□□□ -1.89
HttP42859 Gm23128-202ENSMUST00000196578 133 ntBASIC3.25□□□□□ -1.89
HttP42859 Mir28a-201ENSMUST00000083560 86 ntBASIC3.25□□□□□ -1.89
HttP42859 Gm18189-201ENSMUST00000218153 1951 ntBASIC3.25□□□□□ -1.89
HttP42859 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HttP42859 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HttP42859 Gm24213-201ENSMUST00000158255 258 ntBASIC3.24□□□□□ -1.89
HttP42859 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HttP42859 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HttP42859 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HttP42859 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.24□□□□□ -1.89
HttP42859 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HttP42859 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HttP42859 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HttP42859 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HttP42859 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.24□□□□□ -1.89
HttP42859 Gm13433-201ENSMUST00000121701 240 ntBASIC3.24□□□□□ -1.89
HttP42859 Gm25153-201ENSMUST00000157118 156 ntBASIC3.24□□□□□ -1.89
HttP42859 Gm20574-201ENSMUST00000182867 917 ntBASIC3.24□□□□□ -1.89
HttP42859 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.24□□□□□ -1.89
HttP42859 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.24□□□□□ -1.89
HttP42859 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC3.24□□□□□ -1.89
HttP42859 Gm7422-201ENSMUST00000220115 640 ntBASIC3.24□□□□□ -1.89
HttP42859 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HttP42859 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HttP42859 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HttP42859 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.24□□□□□ -1.89
HttP42859 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC3.24□□□□□ -1.89
HttP42859 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC3.24□□□□□ -1.89
HttP42859 Gm23670-201ENSMUST00000157469 119 ntBASIC3.24□□□□□ -1.89
HttP42859 Gm8874-201ENSMUST00000196826 286 ntBASIC3.24□□□□□ -1.89
HttP42859 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.24□□□□□ -1.89
HttP42859 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HttP42859 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HttP42859 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HttP42859 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HttP42859 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC3.23□□□□□ -1.89
HttP42859 Gm23950-201ENSMUST00000104026 129 ntBASIC3.23□□□□□ -1.89
HttP42859 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HttP42859 Gm23895-201ENSMUST00000158108 160 ntBASIC3.23□□□□□ -1.89
HttP42859 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.23□□□□□ -1.89
HttP42859 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.23□□□□□ -1.89
HttP42859 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.23□□□□□ -1.89
HttP42859 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HttP42859 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HttP42859 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC3.23□□□□□ -1.89
HttP42859 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
HttP42859 Gm26423-201ENSMUST00000104277 128 ntBASIC3.23□□□□□ -1.89
HttP42859 Mir7226-201ENSMUST00000184953 60 ntBASIC3.23□□□□□ -1.89
HttP42859 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
HttP42859 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HttP42859 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HttP42859 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
HttP42859 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
HttP42859 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
HttP42859 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HttP42859 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HttP42859 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms