Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Traf1P39428 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.55□□□□□ -1.68
Traf1P39428 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Traf1P39428 Gm22252-201ENSMUST00000179316 79 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Traf1P39428 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.55□□□□□ -1.68
Traf1P39428 Gm44404-201ENSMUST00000203979 636 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Gm18507-201ENSMUST00000218855 525 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Gm7540-201ENSMUST00000219764 926 ntBASIC4.55□□□□□ -1.68
Traf1P39428 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC4.55□□□□□ -1.68
Traf1P39428 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.55□□□□□ -1.68
Traf1P39428 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC4.55□□□□□ -1.68
Traf1P39428 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Traf1P39428 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Traf1P39428 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Traf1P39428 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Traf1P39428 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
Traf1P39428 Gm23447-201ENSMUST00000082798 163 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Gm22043-201ENSMUST00000082993 158 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Traf1P39428 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Traf1P39428 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Traf1P39428 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Traf1P39428 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Traf1P39428 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Traf1P39428 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Traf1P39428 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Traf1P39428 AC153881.3-201ENSMUST00000218494 1561 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Traf1P39428 Gm25833-201ENSMUST00000104137 133 ntBASIC4.54□□□□□ -1.68
Traf1P39428 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC4.54□□□□□ -1.68
Traf1P39428 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Traf1P39428 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Gm14534-201ENSMUST00000120045 357 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC4.54□□□□□ -1.68
Traf1P39428 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.54□□□□□ -1.68
Traf1P39428 Gm22889-201ENSMUST00000158639 58 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Gm22501-201ENSMUST00000158981 127 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Gm20673-201ENSMUST00000177167 430 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Gm22108-201ENSMUST00000177961 106 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Gm24798-201ENSMUST00000179334 106 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Traf1P39428 Gm5731-201ENSMUST00000190969 481 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Gm7182-201ENSMUST00000193351 732 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Gm42438-201ENSMUST00000197832 974 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Gm8774-201ENSMUST00000203621 692 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.54□□□□□ -1.68
Traf1P39428 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.54□□□□□ -1.68
Traf1P39428 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Gm30738-201ENSMUST00000221346 502 ntBASIC4.54□□□□□ -1.68
Traf1P39428 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.54□□□□□ -1.68
Traf1P39428 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Traf1P39428 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Traf1P39428 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Traf1P39428 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Traf1P39428 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.54□□□□□ -1.68
Traf1P39428 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Traf1P39428 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Traf1P39428 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Traf1P39428 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Traf1P39428 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Traf1P39428 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Traf1P39428 Gm14795-201ENSMUST00000118461 471 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm12335-201ENSMUST00000119738 327 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm13852-201ENSMUST00000122350 242 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.53□□□□□ -1.68
Traf1P39428 Gm25555-201ENSMUST00000158078 111 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm25436-201ENSMUST00000158275 145 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm8161-201ENSMUST00000168739 481 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm26746-201ENSMUST00000181722 487 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm21960-201ENSMUST00000181924 452 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm27718-201ENSMUST00000183721 86 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm27535-201ENSMUST00000183814 157 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm27828-201ENSMUST00000184108 119 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.53□□□□□ -1.68
Traf1P39428 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Traf1P39428 Gm28655-201ENSMUST00000191538 692 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm37543-201ENSMUST00000192443 1031 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm18900-201ENSMUST00000193218 584 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.53□□□□□ -1.68
Traf1P39428 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.53□□□□□ -1.68
Traf1P39428 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.53□□□□□ -1.68
Traf1P39428 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.53□□□□□ -1.68
Traf1P39428 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Traf1P39428 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Traf1P39428 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
Traf1P39428 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Traf1P39428 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Traf1P39428 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Traf1P39428 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Traf1P39428 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Traf1P39428 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Traf1P39428 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Traf1P39428 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 115.1 ms