Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Msx1P13297 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Msx1P13297 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Msx1P13297 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.69□□□□□ -1.5
Msx1P13297 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.68□□□□□ -1.5
Msx1P13297 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Msx1P13297 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
Msx1P13297 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.68□□□□□ -1.5
Msx1P13297 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Msx1P13297 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Msx1P13297 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Msx1P13297 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.68□□□□□ -1.5
Msx1P13297 Gm7657-201ENSMUST00000118851 666 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm6067-201ENSMUST00000121648 491 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Msx1P13297 Gm24997-201ENSMUST00000157910 105 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Msx1P13297 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Msx1P13297 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Gm28943-201ENSMUST00000186187 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm28736-201ENSMUST00000186257 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm29401-201ENSMUST00000186690 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm29178-204ENSMUST00000186784 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm28589-201ENSMUST00000186991 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm28936-201ENSMUST00000187153 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm29121-201ENSMUST00000187611 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm28243-201ENSMUST00000187801 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm28844-202ENSMUST00000187977 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm29111-201ENSMUST00000188823 696 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm29058-201ENSMUST00000189510 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm29624-201ENSMUST00000190018 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm28780-201ENSMUST00000190223 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm28969-211ENSMUST00000190992 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm28990-207ENSMUST00000191219 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm28584-201ENSMUST00000191489 696 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm36468-201ENSMUST00000192119 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm37070-201ENSMUST00000193272 460 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm38138-201ENSMUST00000193274 696 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm31572-201ENSMUST00000193341 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm30175-201ENSMUST00000194173 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm30858-201ENSMUST00000195516 615 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm43724-201ENSMUST00000197516 226 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Gm20144-201ENSMUST00000203031 165 ntBASIC5.68□□□□□ -1.5
Msx1P13297 AC159709.1-201ENSMUST00000220445 349 ntBASIC5.68□□□□□ -1.5
Msx1P13297 AC124772.1-201ENSMUST00000221325 151 ntBASIC5.68□□□□□ -1.5
Msx1P13297 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.68□□□□□ -1.5
Msx1P13297 AC130821.1-201ENSMUST00000221997 293 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm2614-201ENSMUST00000223227 403 ntBASIC5.68□□□□□ -1.5
Msx1P13297 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Msx1P13297 Mir337-201ENSMUST00000083592 97 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Msx1P13297 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Msx1P13297 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.68□□□□□ -1.5
Msx1P13297 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Msx1P13297 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Msx1P13297 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Msx1P13297 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Msx1P13297 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msx1P13297 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.67□□□□□ -1.5
Msx1P13297 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Msx1P13297 Gm14294-201ENSMUST00000119749 751 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Gm12650-201ENSMUST00000121966 258 ntBASIC5.67□□□□□ -1.5
Msx1P13297 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Gm6969-201ENSMUST00000140065 342 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Gm25150-201ENSMUST00000157121 60 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Gm25520-201ENSMUST00000158389 118 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.67□□□□□ -1.5
Msx1P13297 Mir3095-201ENSMUST00000175552 87 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Gm26501-201ENSMUST00000178307 107 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Mir6346-201ENSMUST00000183982 81 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Mir6362-201ENSMUST00000184329 107 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.67□□□□□ -1.5
Msx1P13297 Gm37358-201ENSMUST00000195492 479 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Gm44922-201ENSMUST00000206690 90 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Gm8863-201ENSMUST00000216630 926 ntBASIC5.67□□□□□ -1.5
Msx1P13297 Gm29884-201ENSMUST00000218403 453 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms