Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RaraP11416 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RaraP11416 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RaraP11416 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.64□□□□□ -1.51
RaraP11416 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RaraP11416 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
RaraP11416 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RaraP11416 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.63□□□□□ -1.51
RaraP11416 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RaraP11416 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.63□□□□□ -1.51
RaraP11416 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RaraP11416 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RaraP11416 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RaraP11416 Gm14591-201ENSMUST00000120407 518 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm14578-201ENSMUST00000122166 391 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm24719-201ENSMUST00000157520 110 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm24504-201ENSMUST00000157679 100 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm24395-201ENSMUST00000158139 125 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm23581-201ENSMUST00000158531 63 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm25718-201ENSMUST00000158632 118 ntBASIC5.63□□□□□ -1.51
RaraP11416 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RaraP11416 Gm11395-201ENSMUST00000181011 499 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm11394-201ENSMUST00000181421 517 ntBASIC5.63□□□□□ -1.51
RaraP11416 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm2325-201ENSMUST00000186637 581 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm28717-201ENSMUST00000189950 315 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm2719-201ENSMUST00000191929 444 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm18964-201ENSMUST00000193013 563 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm38015-201ENSMUST00000193048 188 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm8039-201ENSMUST00000204758 712 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.63□□□□□ -1.51
RaraP11416 Gm45508-201ENSMUST00000209298 299 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.63□□□□□ -1.51
RaraP11416 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.63□□□□□ -1.51
RaraP11416 Gm45750-201ENSMUST00000211966 354 ntBASIC5.63□□□□□ -1.51
RaraP11416 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.63□□□□□ -1.51
RaraP11416 AV026068-237ENSMUST00000226075 572 ntBASIC5.63□□□□□ -1.51
RaraP11416 AC125311.1-201ENSMUST00000226950 220 ntBASIC5.63□□□□□ -1.51
RaraP11416 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.63□□□□□ -1.51
RaraP11416 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.63□□□□□ -1.51
RaraP11416 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RaraP11416 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RaraP11416 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RaraP11416 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RaraP11416 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RaraP11416 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.63□□□□□ -1.51
RaraP11416 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RaraP11416 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.63□□□□□ -1.51
RaraP11416 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RaraP11416 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RaraP11416 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RaraP11416 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.62□□□□□ -1.51
RaraP11416 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
RaraP11416 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RaraP11416 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RaraP11416 Gm24350-201ENSMUST00000104163 133 ntBASIC5.62□□□□□ -1.51
RaraP11416 Gm24338-201ENSMUST00000104205 127 ntBASIC5.62□□□□□ -1.51
RaraP11416 Gm11486-201ENSMUST00000107322 478 ntBASIC5.62□□□□□ -1.51
RaraP11416 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RaraP11416 Gm11936-201ENSMUST00000118323 160 ntBASIC5.62□□□□□ -1.51
RaraP11416 Gm12691-201ENSMUST00000120186 456 ntBASIC5.62□□□□□ -1.51
RaraP11416 Gm11825-201ENSMUST00000120710 736 ntBASIC5.62□□□□□ -1.51
RaraP11416 Gm14765-201ENSMUST00000121954 326 ntBASIC5.62□□□□□ -1.51
RaraP11416 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RaraP11416 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.62□□□□□ -1.51
RaraP11416 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.62□□□□□ -1.51
RaraP11416 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.62□□□□□ -1.51
RaraP11416 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.62□□□□□ -1.51
RaraP11416 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RaraP11416 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.62□□□□□ -1.51
RaraP11416 Gm25152-201ENSMUST00000157117 114 ntBASIC5.62□□□□□ -1.51
RaraP11416 Gm26172-201ENSMUST00000158421 134 ntBASIC5.62□□□□□ -1.51
RaraP11416 Gm22326-201ENSMUST00000158897 351 ntBASIC5.62□□□□□ -1.51
RaraP11416 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RaraP11416 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.62□□□□□ -1.51
RaraP11416 Gm27528-201ENSMUST00000183544 205 ntBASIC5.62□□□□□ -1.51
RaraP11416 Mir7220-201ENSMUST00000183978 60 ntBASIC5.62□□□□□ -1.51
RaraP11416 Gm6075-201ENSMUST00000186816 486 ntBASIC5.62□□□□□ -1.51
RaraP11416 Gm28724-202ENSMUST00000194218 295 ntBASIC5.62□□□□□ -1.51
RaraP11416 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RaraP11416 Gm44765-201ENSMUST00000206927 601 ntBASIC5.62□□□□□ -1.51
RaraP11416 Gm4587-201ENSMUST00000209135 637 ntBASIC5.62□□□□□ -1.51
RaraP11416 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RaraP11416 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.62□□□□□ -1.51
RaraP11416 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC5.62□□□□□ -1.51
RaraP11416 Gm2645-201ENSMUST00000223516 547 ntBASIC5.62□□□□□ -1.51
RaraP11416 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.62□□□□□ -1.51
RaraP11416 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RaraP11416 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RaraP11416 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.62□□□□□ -1.51
RaraP11416 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RaraP11416 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RaraP11416 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RaraP11416 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RaraP11416 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RaraP11416 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RaraP11416 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RaraP11416 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms