Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.04□□□□□ -1.76
Lire1P11260 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm43096-201ENSMUST00000196173 421 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm43601-201ENSMUST00000196294 945 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm43370-201ENSMUST00000196437 284 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm8774-201ENSMUST00000203621 692 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.04□□□□□ -1.76
Lire1P11260 Gm17811-201ENSMUST00000206193 387 ntBASIC4.04□□□□□ -1.76
Lire1P11260 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.04□□□□□ -1.76
Lire1P11260 Gm18462-201ENSMUST00000208112 417 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.04□□□□□ -1.76
Lire1P11260 Gm35262-201ENSMUST00000215133 267 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm8681-201ENSMUST00000219115 618 ntBASIC4.04□□□□□ -1.76
Lire1P11260 AC140254.1-201ENSMUST00000220063 331 ntBASIC4.04□□□□□ -1.76
Lire1P11260 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lire1P11260 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lire1P11260 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Lire1P11260 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lire1P11260 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
Lire1P11260 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lire1P11260 Gm6545-201ENSMUST00000217186 1786 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lire1P11260 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Lire1P11260 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lire1P11260 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lire1P11260 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Lire1P11260 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lire1P11260 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lire1P11260 Gm44897-201ENSMUST00000206187 1341 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.03□□□□□ -1.76
Lire1P11260 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lire1P11260 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lire1P11260 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
Lire1P11260 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Lire1P11260 Gm23709-201ENSMUST00000104364 130 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC4.03□□□□□ -1.76
Lire1P11260 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lire1P11260 Gm5963-201ENSMUST00000143451 236 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gm24224-201ENSMUST00000158828 258 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gm26362-201ENSMUST00000158865 315 ntBASIC4.03□□□□□ -1.76
Lire1P11260 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Lire1P11260 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Lire1P11260 Gm22252-201ENSMUST00000179316 79 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gm29513-201ENSMUST00000185741 202 ntBASIC4.03□□□□□ -1.76
Lire1P11260 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.03□□□□□ -1.76
Lire1P11260 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.03□□□□□ -1.76
Lire1P11260 Gm38053-201ENSMUST00000193938 160 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gm43407-201ENSMUST00000199816 317 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gm20177-201ENSMUST00000203705 334 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gm18015-201ENSMUST00000214879 316 ntBASIC4.03□□□□□ -1.76
Lire1P11260 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.03□□□□□ -1.76
Lire1P11260 AC153544.1-201ENSMUST00000217988 400 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gm19233-201ENSMUST00000219772 936 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.03□□□□□ -1.76
Lire1P11260 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.03□□□□□ -1.76
Lire1P11260 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.03□□□□□ -1.76
Lire1P11260 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lire1P11260 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Lire1P11260 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lire1P11260 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lire1P11260 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Lire1P11260 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.03□□□□□ -1.76
Lire1P11260 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lire1P11260 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.03□□□□□ -1.77
Lire1P11260 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
Lire1P11260 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Lire1P11260 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Lire1P11260 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lire1P11260 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Lire1P11260 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Lire1P11260 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lire1P11260 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm14880-201ENSMUST00000117581 292 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Gm14517-201ENSMUST00000119040 337 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Gm12515-201ENSMUST00000120116 361 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.02□□□□□ -1.77
Lire1P11260 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.02□□□□□ -1.77
Lire1P11260 Gm24689-201ENSMUST00000157760 104 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Gm24961-201ENSMUST00000157918 184 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Gm25224-201ENSMUST00000158195 68 ntBASIC4.02□□□□□ -1.77
Lire1P11260 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lire1P11260 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms