Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Chmp6P0C0A3 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Chmp6P0C0A3 Snora70-201ENSMUST00000083047 137 ntBASIC3.86□□□□□ -1.79
Chmp6P0C0A3 Gm25480-201ENSMUST00000083217 133 ntBASIC3.86□□□□□ -1.79
Chmp6P0C0A3 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Chmp6P0C0A3 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.86□□□□□ -1.79
Chmp6P0C0A3 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Chmp6P0C0A3 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Chmp6P0C0A3 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Chmp6P0C0A3 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.86□□□□□ -1.79
Chmp6P0C0A3 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Chmp6P0C0A3 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm22320-201ENSMUST00000157149 312 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm22885-201ENSMUST00000157410 107 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Snord92-201ENSMUST00000175548 85 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm27718-201ENSMUST00000183721 86 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm29525-201ENSMUST00000189844 699 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm29523-201ENSMUST00000191415 699 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm6680-201ENSMUST00000192789 950 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm37164-201ENSMUST00000192809 637 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm33973-201ENSMUST00000195148 534 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm19243-201ENSMUST00000198592 269 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm3010-201ENSMUST00000198805 448 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Chmp6P0C0A3 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm25727-201ENSMUST00000104522 131 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm12392-201ENSMUST00000118014 938 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm12001-201ENSMUST00000121727 913 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm14907-201ENSMUST00000121948 854 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm7855-201ENSMUST00000137737 687 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm17075-201ENSMUST00000171924 670 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm4207-201ENSMUST00000173144 960 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm23152-201ENSMUST00000175322 116 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm38098-201ENSMUST00000194115 241 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm37575-201ENSMUST00000195467 309 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm42926-201ENSMUST00000200496 697 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm20177-201ENSMUST00000203705 334 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm44294-201ENSMUST00000205090 728 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm35857-201ENSMUST00000212739 178 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm7530-201ENSMUST00000218466 605 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Snord15a-201ENSMUST00000083888 148 ntBASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Chmp6P0C0A3 Gm44286-201ENSMUST00000204098 1487 ntBASIC3.84□□□□□ -1.8
Chmp6P0C0A3 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Chmp6P0C0A3 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.84□□□□□ -1.8
Chmp6P0C0A3 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Chmp6P0C0A3 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.84□□□□□ -1.8
Chmp6P0C0A3 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Chmp6P0C0A3 Gm24715-201ENSMUST00000102377 95 ntBASIC3.83□□□□□ -1.8
Chmp6P0C0A3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Chmp6P0C0A3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Chmp6P0C0A3 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC3.83□□□□□ -1.8
Chmp6P0C0A3 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.83□□□□□ -1.8
Chmp6P0C0A3 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.83□□□□□ -1.8
Chmp6P0C0A3 Gm14126-201ENSMUST00000122345 395 ntBASIC3.83□□□□□ -1.8
Chmp6P0C0A3 Gm23602-201ENSMUST00000157258 132 ntBASIC3.83□□□□□ -1.8
Chmp6P0C0A3 Gm23257-201ENSMUST00000158322 132 ntBASIC3.83□□□□□ -1.8
Chmp6P0C0A3 Gm22501-201ENSMUST00000158981 127 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms