Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.28□□□□□ -1.72
Lmx1bO88609 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Lmx1bO88609 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Lmx1bO88609 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm22657-201ENSMUST00000104197 132 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm14366-201ENSMUST00000121970 730 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm22726-201ENSMUST00000158089 179 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm25923-201ENSMUST00000158312 138 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.28□□□□□ -1.72
Lmx1bO88609 Mir6541-201ENSMUST00000183649 110 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm27875-201ENSMUST00000184425 123 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm28974-201ENSMUST00000187893 231 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm28404-201ENSMUST00000190242 453 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.28□□□□□ -1.72
Lmx1bO88609 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Mir5121-201ENSMUST00000198528 74 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm5284-201ENSMUST00000199053 903 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm43026-201ENSMUST00000202972 325 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm44002-201ENSMUST00000205134 594 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm44757-201ENSMUST00000206373 157 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Lmx1bO88609 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm25699-201ENSMUST00000082896 167 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm22364-201ENSMUST00000083097 98 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lmx1bO88609 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.28□□□□□ -1.72
Lmx1bO88609 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
Lmx1bO88609 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.28□□□□□ -1.73
Lmx1bO88609 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Lmx1bO88609 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Lmx1bO88609 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lmx1bO88609 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lmx1bO88609 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm25213-201ENSMUST00000102388 113 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Mir676-201ENSMUST00000102443 89 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm14670-201ENSMUST00000117327 337 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm14706-201ENSMUST00000117744 255 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm11781-201ENSMUST00000118328 472 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm7429-201ENSMUST00000118664 348 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm11843-201ENSMUST00000118984 425 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm11631-201ENSMUST00000119220 156 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm14352-201ENSMUST00000119250 449 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm13482-201ENSMUST00000119842 254 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm16362-201ENSMUST00000135189 214 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm7855-201ENSMUST00000137737 687 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm24901-201ENSMUST00000158125 110 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm16101-201ENSMUST00000160695 430 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm8161-201ENSMUST00000168739 481 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm22177-201ENSMUST00000175002 158 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm20701-201ENSMUST00000176082 347 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm21171-201ENSMUST00000180048 673 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Mir7022-201ENSMUST00000183749 61 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm28151-201ENSMUST00000189404 951 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm44923-201ENSMUST00000206673 85 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm18644-201ENSMUST00000211458 815 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC4.27□□□□□ -1.73
Lmx1bO88609 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 CT025602.1-201ENSMUST00000227281 382 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Lmx1bO88609 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm24031-201ENSMUST00000083930 131 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Lmx1bO88609 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Lmx1bO88609 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Lmx1bO88609 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lmx1bO88609 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Lmx1bO88609 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.27□□□□□ -1.73
Lmx1bO88609 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Lmx1bO88609 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Lmx1bO88609 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
Lmx1bO88609 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms