Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Hmgb3O54879 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm38375-201ENSMUST00000194610 2227 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm11406-201ENSMUST00000117418 484 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm12988-201ENSMUST00000119054 478 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm11506-201ENSMUST00000122414 470 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm16060-201ENSMUST00000153140 478 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm25913-201ENSMUST00000157617 135 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm16353-201ENSMUST00000159458 1223 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm26988-201ENSMUST00000183296 945 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Mir7006-201ENSMUST00000183624 69 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Mir6238-201ENSMUST00000184140 129 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Mir6911-201ENSMUST00000184241 69 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm28877-201ENSMUST00000191349 604 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm38334-201ENSMUST00000195060 313 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm45553-201ENSMUST00000209929 507 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm45327-201ENSMUST00000211612 565 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm18585-201ENSMUST00000215197 556 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Hmgb3O54879 AL662807.1-201ENSMUST00000224183 126 ntBASIC2.72□□□□□ -1.97
Hmgb3O54879 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Hmgb3O54879 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Hmgb3O54879 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Hmgb3O54879 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Hmgb3O54879 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Hmgb3O54879 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Hmgb3O54879 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Hmgb3O54879 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.71□□□□□ -1.97
Hmgb3O54879 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
Hmgb3O54879 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Hmgb3O54879 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm18491-201ENSMUST00000192492 1594 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Hmgb3O54879 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Hmgb3O54879 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm14621-201ENSMUST00000117709 689 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm15399-201ENSMUST00000118055 724 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm14771-201ENSMUST00000118249 203 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm12722-201ENSMUST00000118507 493 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm11913-201ENSMUST00000119094 336 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm5384-201ENSMUST00000120313 463 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 n-R5s68-201ENSMUST00000122639 82 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm22211-201ENSMUST00000158097 156 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm4761-201ENSMUST00000178086 582 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm27033-201ENSMUST00000183226 544 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm28148-201ENSMUST00000186924 697 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm30280-201ENSMUST00000192214 262 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm6680-201ENSMUST00000192789 950 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm9023-201ENSMUST00000198408 1038 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Hmgb3O54879 Gm7726-201ENSMUST00000206241 231 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 AC130673.2-201ENSMUST00000228091 797 ntBASIC2.71□□□□□ -1.98
Hmgb3O54879 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Hmgb3O54879 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Hmgb3O54879 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Hmgb3O54879 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Hmgb3O54879 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Hmgb3O54879 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Hmgb3O54879 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Hmgb3O54879 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm12805-201ENSMUST00000117305 1048 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm15026-201ENSMUST00000119219 458 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm7219-201ENSMUST00000119619 297 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm17117-201ENSMUST00000163665 299 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm11394-201ENSMUST00000181421 517 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm26746-201ENSMUST00000181722 487 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm8296-201ENSMUST00000185597 524 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm19280-201ENSMUST00000190191 205 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm37617-201ENSMUST00000194309 159 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm43604-201ENSMUST00000199799 705 ntBASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.7□□□□□ -1.98
Hmgb3O54879 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms