Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm43494-201ENSMUST00000197672 388 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.1□□□□□ -1.75
Clk3O35492 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.1□□□□□ -1.75
Clk3O35492 Gm44181-201ENSMUST00000203106 483 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC4.1□□□□□ -1.75
Clk3O35492 Gm19908-201ENSMUST00000204684 391 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Clk3O35492 Gm44757-201ENSMUST00000206373 157 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC4.1□□□□□ -1.75
Clk3O35492 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.1□□□□□ -1.75
Clk3O35492 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Gm7786-201ENSMUST00000210494 436 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Clk3O35492 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Gm46136-201ENSMUST00000214730 565 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Gm46190-201ENSMUST00000219650 427 ntBASIC4.1□□□□□ -1.75
Clk3O35492 AC153924.1-201ENSMUST00000220117 312 ntBASIC4.1□□□□□ -1.75
Clk3O35492 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Gm6988-201ENSMUST00000222676 375 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Clk3O35492 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Mir28a-201ENSMUST00000083560 86 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Clk3O35492 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.1□□□□□ -1.75
Clk3O35492 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Clk3O35492 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC4.1□□□□□ -1.75
Clk3O35492 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Clk3O35492 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Clk3O35492 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Clk3O35492 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Clk3O35492 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Clk3O35492 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
Clk3O35492 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Clk3O35492 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Clk3O35492 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Clk3O35492 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Clk3O35492 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Clk3O35492 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Clk3O35492 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.09□□□□□ -1.75
Clk3O35492 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Clk3O35492 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.09□□□□□ -1.75
Clk3O35492 Gm16060-201ENSMUST00000153140 478 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Clk3O35492 Gm26085-201ENSMUST00000157900 116 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Gm25264-201ENSMUST00000158519 117 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Gm26028-201ENSMUST00000158660 294 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Gm2389-201ENSMUST00000160487 189 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Gm16588-201ENSMUST00000162889 355 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Clk3O35492 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Clk3O35492 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Clk3O35492 Gm37167-201ENSMUST00000194946 396 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Gm42438-201ENSMUST00000197832 974 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Gm3010-201ENSMUST00000198805 448 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.09□□□□□ -1.75
Clk3O35492 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC4.09□□□□□ -1.75
Clk3O35492 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.09□□□□□ -1.75
Clk3O35492 Gm18557-201ENSMUST00000218710 433 ntBASIC4.09□□□□□ -1.75
Clk3O35492 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Clk3O35492 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Clk3O35492 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Clk3O35492 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Clk3O35492 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Clk3O35492 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Clk3O35492 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Clk3O35492 Gm14445-201ENSMUST00000117051 1484 ntBASIC4.09□□□□□ -1.75
Clk3O35492 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Clk3O35492 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Clk3O35492 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Clk3O35492 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Clk3O35492 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Clk3O35492 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Clk3O35492 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clk3O35492 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Clk3O35492 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Clk3O35492 Gm12719-201ENSMUST00000118859 241 ntBASIC4.08□□□□□ -1.76
Clk3O35492 Gm12495-201ENSMUST00000119750 447 ntBASIC4.08□□□□□ -1.76
Clk3O35492 Gm13557-201ENSMUST00000120771 382 ntBASIC4.08□□□□□ -1.76
Clk3O35492 Gm11896-201ENSMUST00000121105 820 ntBASIC4.08□□□□□ -1.76
Clk3O35492 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clk3O35492 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC4.08□□□□□ -1.76
Clk3O35492 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.08□□□□□ -1.76
Clk3O35492 Gm25278-201ENSMUST00000157267 120 ntBASIC4.08□□□□□ -1.76
Clk3O35492 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clk3O35492 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.08□□□□□ -1.76
Clk3O35492 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC4.08□□□□□ -1.76
Clk3O35492 Gm25534-201ENSMUST00000175365 125 ntBASIC4.08□□□□□ -1.76
Clk3O35492 Gm25874-201ENSMUST00000178030 79 ntBASIC4.08□□□□□ -1.76
Clk3O35492 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.08□□□□□ -1.76
Clk3O35492 Gm29073-201ENSMUST00000185563 664 ntBASIC4.08□□□□□ -1.76
Clk3O35492 Gm29165-201ENSMUST00000190655 664 ntBASIC4.08□□□□□ -1.76
Clk3O35492 Gm29211-201ENSMUST00000191470 664 ntBASIC4.08□□□□□ -1.76
Clk3O35492 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms