Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm12379-201ENSMUST00000119607 391 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm14766-201ENSMUST00000121689 367 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm22514-201ENSMUST00000122547 308 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm22199-201ENSMUST00000122660 126 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm22076-201ENSMUST00000158601 84 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm25942-201ENSMUST00000180080 110 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm28974-201ENSMUST00000187893 231 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm43712-201ENSMUST00000198020 291 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm17775-201ENSMUST00000198542 258 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm44634-201ENSMUST00000206119 152 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm45392-201ENSMUST00000210441 214 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 AC153924.1-201ENSMUST00000220117 312 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm46994-201ENSMUST00000221523 219 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm25699-201ENSMUST00000082896 167 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm23510-201ENSMUST00000083083 163 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
Shisa8J3QNX5 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.01□□□□□ -1.77
Shisa8J3QNX5 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm43594-201ENSMUST00000201153 3442 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm22273-201ENSMUST00000104040 132 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm16179-201ENSMUST00000120685 373 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm15267-201ENSMUST00000120888 464 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm16254-201ENSMUST00000131528 730 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm22236-201ENSMUST00000157093 106 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm20462-201ENSMUST00000172623 408 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm18522-201ENSMUST00000173947 650 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm29610-201ENSMUST00000187749 453 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm29552-201ENSMUST00000190548 660 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm42805-201ENSMUST00000196158 276 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm45006-201ENSMUST00000206078 690 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 AC134334.1-201ENSMUST00000214277 255 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm7495-201ENSMUST00000215099 426 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4□□□□□ -1.77
Shisa8J3QNX5 AC102369.1-201ENSMUST00000218415 373 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 AC101677.1-201ENSMUST00000218590 158 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4□□□□□ -1.77
Shisa8J3QNX5 AC164567.4-201ENSMUST00000219708 483 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 CT025616.1-201ENSMUST00000221158 412 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4□□□□□ -1.77
Shisa8J3QNX5 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm3565-201ENSMUST00000222670 609 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 AC159263.3-201ENSMUST00000223434 460 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Shisa8J3QNX5 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm26064-201ENSMUST00000083381 109 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Mir342-201ENSMUST00000083502 99 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Mir133b-201ENSMUST00000083546 119 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Shisa8J3QNX5 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Gm37639-201ENSMUST00000191623 2785 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4□□□□□ -1.77
Shisa8J3QNX5 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Shisa8J3QNX5 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms