Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm28263-201ENSMUST00000185884 400 ntBASIC5.09□□□□□ -1.59
Trim55G3X8Y1 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Gm37399-201ENSMUST00000195224 416 ntBASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Gm44149-201ENSMUST00000204256 226 ntBASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim55G3X8Y1 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim55G3X8Y1 AC155921.1-201ENSMUST00000216568 3841 ntBASIC5.09□□□□□ -1.59
Trim55G3X8Y1 AC152946.2-201ENSMUST00000219071 337 ntBASIC5.09□□□□□ -1.59
Trim55G3X8Y1 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Gm25079-201ENSMUST00000082529 203 ntBASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Mir375-201ENSMUST00000083682 64 ntBASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Gm43658-201ENSMUST00000202348 4176 ntBASIC5.09□□□□□ -1.59
Trim55G3X8Y1 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.09□□□□□ -1.6
Trim55G3X8Y1 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.09□□□□□ -1.6
Trim55G3X8Y1 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Trim55G3X8Y1 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Mir466j-201ENSMUST00000116876 122 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm15014-201ENSMUST00000120742 258 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm22514-201ENSMUST00000122547 308 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm26373-201ENSMUST00000157833 103 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm16378-201ENSMUST00000179168 342 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm23144-201ENSMUST00000180226 107 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm28255-201ENSMUST00000187101 694 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm29097-201ENSMUST00000190273 422 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm28098-201ENSMUST00000191361 699 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm37757-201ENSMUST00000193072 210 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm3010-201ENSMUST00000198805 448 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm44295-201ENSMUST00000203805 437 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm44092-201ENSMUST00000204470 258 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm19140-201ENSMUST00000209790 421 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm7540-201ENSMUST00000219764 926 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 AC115878.1-201ENSMUST00000227247 334 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim55G3X8Y1 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm14558-201ENSMUST00000117458 381 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm12261-201ENSMUST00000117499 645 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm12039-201ENSMUST00000118219 180 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm22601-201ENSMUST00000157595 250 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm23124-201ENSMUST00000157650 107 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm26490-201ENSMUST00000157879 140 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm23312-201ENSMUST00000158774 102 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm27599-201ENSMUST00000183758 174 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Npn2-202ENSMUST00000189275 235 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm28552-201ENSMUST00000190725 388 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm5731-201ENSMUST00000190969 481 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm38075-201ENSMUST00000191979 920 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm38044-201ENSMUST00000192964 487 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm37235-201ENSMUST00000195171 59 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gm42566-201ENSMUST00000197120 643 ntBASIC5.07□□□□□ -1.6
Trim55G3X8Y1 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms