Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm15022-201ENSMUST00000122074 746 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm7846-201ENSMUST00000145844 274 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm22398-201ENSMUST00000174941 125 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm25731-201ENSMUST00000175167 125 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm15143-201ENSMUST00000178180 714 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm38149-201ENSMUST00000191943 339 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm37193-201ENSMUST00000193087 513 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Shank1D3YZU1 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm17893-201ENSMUST00000203017 770 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm18903-201ENSMUST00000215343 480 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm12582-201ENSMUST00000030555 697 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Mir421-201ENSMUST00000083575 76 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm6893-201ENSMUST00000118385 522 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm14506-201ENSMUST00000121165 536 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Shank1D3YZU1 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm27964-201ENSMUST00000185195 62 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm19503-201ENSMUST00000187109 241 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm29281-201ENSMUST00000188077 381 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm8035-201ENSMUST00000204625 687 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm19761-201ENSMUST00000205372 391 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm25404-201ENSMUST00000082970 107 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm22739-201ENSMUST00000083437 160 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Mir370-201ENSMUST00000083499 79 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Mir34b-201ENSMUST00000083558 84 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm45137-201ENSMUST00000208652 4415 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.54□□□□□ -1.84
Shank1D3YZU1 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Shank1D3YZU1 Gm14516-201ENSMUST00000120012 252 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm22889-201ENSMUST00000158639 58 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm27659-201ENSMUST00000183472 98 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm3454-201ENSMUST00000185571 412 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm37337-201ENSMUST00000192601 993 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 AC174776.1-201ENSMUST00000221509 405 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm9628-201ENSMUST00000222169 725 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 AC174776.2-201ENSMUST00000222561 405 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 CT025548.1-201ENSMUST00000227459 257 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Mir673-201ENSMUST00000102361 91 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm23317-201ENSMUST00000157999 129 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm23059-201ENSMUST00000158978 107 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.53□□□□□ -1.84
Shank1D3YZU1 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms