Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.27□□□□□ -1.89
Scn8aQ9WTU3 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Scn8aQ9WTU3 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn8aQ9WTU3 Gm22864-201ENSMUST00000083950 130 ntBASIC3.27□□□□□ -1.89
Scn8aQ9WTU3 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Scn8aQ9WTU3 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Gm24119-201ENSMUST00000103979 246 ntBASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Gm14987-201ENSMUST00000117820 676 ntBASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Gm18486-201ENSMUST00000184040 298 ntBASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.26□□□□□ -1.89
Scn8aQ9WTU3 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm38356-201ENSMUST00000194313 408 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm21006-201ENSMUST00000196930 667 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm45733-201ENSMUST00000212988 437 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm25308-201ENSMUST00000104171 158 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm14647-201ENSMUST00000119392 680 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm14527-201ENSMUST00000179300 639 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm26991-201ENSMUST00000180950 620 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Gm43214-201ENSMUST00000199242 352 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 AF357428-201ENSMUST00000083815 69 ntBASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Scn8aQ9WTU3 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm23747-201ENSMUST00000104228 131 ntBASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm24138-201ENSMUST00000157572 114 ntBASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm26028-201ENSMUST00000158660 294 ntBASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm29038-201ENSMUST00000191543 678 ntBASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm37293-201ENSMUST00000191658 295 ntBASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm43932-201ENSMUST00000204499 52 ntBASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm44521-201ENSMUST00000206469 217 ntBASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm26129-201ENSMUST00000082719 107 ntBASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.24□□□□□ -1.89
Scn8aQ9WTU3 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm26933-201ENSMUST00000182320 827 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm28113-201ENSMUST00000188280 229 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm5358-201ENSMUST00000212814 353 ntBASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn8aQ9WTU3 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms