Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm11874-201ENSMUST00000117437 130 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm14299-201ENSMUST00000117586 397 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm14554-201ENSMUST00000119548 661 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm12118-201ENSMUST00000119766 532 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm11387-201ENSMUST00000120266 772 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm14907-201ENSMUST00000121948 854 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm29105-201ENSMUST00000187256 450 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm10925-201ENSMUST00000189941 678 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Mir129b-201ENSMUST00000197461 65 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm43476-201ENSMUST00000197873 405 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm8745-201ENSMUST00000207846 782 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm44887-201ENSMUST00000208980 178 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Gm7099-201ENSMUST00000080066 554 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Mir370-201ENSMUST00000083499 79 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Trim3Q9R1R2 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm4736-201ENSMUST00000100870 380 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm14768-201ENSMUST00000122126 678 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm23198-201ENSMUST00000158811 91 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm16563-201ENSMUST00000162673 423 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm17030-201ENSMUST00000167016 393 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm23816-201ENSMUST00000179617 132 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm29598-201ENSMUST00000188996 588 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm4248-201ENSMUST00000196905 316 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm5917-201ENSMUST00000217638 721 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm8942-201ENSMUST00000217892 400 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm17829-201ENSMUST00000219782 344 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm5176-202ENSMUST00000220267 583 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 AC133654.1-201ENSMUST00000228411 672 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim3Q9R1R2 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Gm15377-201ENSMUST00000119594 246 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Gm12587-201ENSMUST00000120180 427 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Gm12591-201ENSMUST00000122407 1177 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Gm2862-201ENSMUST00000161524 328 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Gm20776-201ENSMUST00000189940 700 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Gm19774-201ENSMUST00000190667 114 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Gm3933-201ENSMUST00000195391 439 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trim3Q9R1R2 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms