Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Hba-ps4-201ENSMUST00000128900 447 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm26102-201ENSMUST00000157251 284 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm26170-201ENSMUST00000158419 148 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm6872-201ENSMUST00000165001 700 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm23450-201ENSMUST00000178285 91 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm21673-201ENSMUST00000186640 436 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm28163-201ENSMUST00000187099 325 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm21135-201ENSMUST00000189023 436 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm19193-201ENSMUST00000190263 590 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm9722-201ENSMUST00000194568 802 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm36939-201ENSMUST00000194889 439 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm37900-201ENSMUST00000195510 3805 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm8929-201ENSMUST00000197781 1132 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Mir219c-201ENSMUST00000199860 60 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm43393-201ENSMUST00000200147 194 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Mir7227-201ENSMUST00000200408 59 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 AC158803.1-201ENSMUST00000219495 316 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm43831-201ENSMUST00000200461 2598 ntBASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Prpf40aQ9R1C7 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 AC101945.4-201ENSMUST00000228464 1976 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm43389-201ENSMUST00000196080 2595 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm23839-201ENSMUST00000116957 109 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm13439-201ENSMUST00000117541 409 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm14823-201ENSMUST00000117698 238 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm13511-201ENSMUST00000121167 363 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm25152-201ENSMUST00000157117 114 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm23581-201ENSMUST00000158531 63 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm8214-201ENSMUST00000172123 351 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm22122-201ENSMUST00000175147 200 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm27887-201ENSMUST00000184367 102 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm28255-201ENSMUST00000187101 694 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm3010-201ENSMUST00000198805 448 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 AC138290.2-201ENSMUST00000218822 369 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 CT009718.4-201ENSMUST00000221881 109 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm26447-201ENSMUST00000082448 129 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 AC113059.3-201ENSMUST00000217423 2777 ntBASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Prpf40aQ9R1C7 AC153969.1-201ENSMUST00000214047 2605 ntBASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Gm22831-201ENSMUST00000102473 109 ntBASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Gm11699-201ENSMUST00000119016 401 ntBASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Gm11582-201ENSMUST00000121041 236 ntBASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Gm14287-201ENSMUST00000121060 117 ntBASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Gm12936-201ENSMUST00000121439 301 ntBASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Gm16358-201ENSMUST00000146046 210 ntBASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Gm22518-201ENSMUST00000158267 68 ntBASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Gm3027-201ENSMUST00000167579 451 ntBASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Gm3104-201ENSMUST00000171004 473 ntBASIC6.03□□□□□ -1.44
Prpf40aQ9R1C7 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms