Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Six6Q9QZ28 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Six6Q9QZ28 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC2.56□□□□□ -2
Six6Q9QZ28 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC2.56□□□□□ -2
Six6Q9QZ28 Gm20203-201ENSMUST00000192352 332 ntBASIC2.56□□□□□ -2
Six6Q9QZ28 Trbv28-201ENSMUST00000192804 264 ntBASIC2.56□□□□□ -2
Six6Q9QZ28 Gm43440-201ENSMUST00000201957 729 ntBASIC2.56□□□□□ -2
Six6Q9QZ28 Gm43371-201ENSMUST00000202838 1031 ntBASIC2.56□□□□□ -2
Six6Q9QZ28 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC2.56□□□□□ -2
Six6Q9QZ28 Gm45209-201ENSMUST00000207122 353 ntBASIC2.56□□□□□ -2
Six6Q9QZ28 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC2.56□□□□□ -2
Six6Q9QZ28 AC134537.2-201ENSMUST00000217770 575 ntBASIC2.56□□□□□ -2
Six6Q9QZ28 Gm3213-201ENSMUST00000219296 441 ntBASIC2.56□□□□□ -2
Six6Q9QZ28 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Six6Q9QZ28 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC2.56□□□□□ -2
Six6Q9QZ28 Snora23-201ENSMUST00000082517 184 ntBASIC2.56□□□□□ -2
Six6Q9QZ28 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Six6Q9QZ28 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Six6Q9QZ28 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.56□□□□□ -2
Six6Q9QZ28 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.56□□□□□ -2
Six6Q9QZ28 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.56□□□□□ -2
Six6Q9QZ28 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Six6Q9QZ28 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
Six6Q9QZ28 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC2.55□□□□□ -2
Six6Q9QZ28 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC2.55□□□□□ -2
Six6Q9QZ28 Gm16060-201ENSMUST00000153140 478 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm27592-201ENSMUST00000157729 126 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC2.55□□□□□ -2
Six6Q9QZ28 Gm18522-201ENSMUST00000173947 650 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm22174-201ENSMUST00000175050 125 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm22692-201ENSMUST00000175055 125 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm27634-201ENSMUST00000175060 126 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm22460-201ENSMUST00000175269 124 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm25535-201ENSMUST00000175364 125 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm25534-201ENSMUST00000175365 125 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm24365-201ENSMUST00000175384 125 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm44310-201ENSMUST00000175424 126 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm26061-201ENSMUST00000175584 108 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm22639-201ENSMUST00000175591 125 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC2.55□□□□□ -2
Six6Q9QZ28 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC2.55□□□□□ -2
Six6Q9QZ28 Gm24979-201ENSMUST00000178626 126 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Six6Q9QZ28 Gm27392-201ENSMUST00000185041 101 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm27743-201ENSMUST00000185136 126 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm28685-201ENSMUST00000187545 1101 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC2.55□□□□□ -2
Six6Q9QZ28 Gm43841-201ENSMUST00000199491 586 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC2.55□□□□□ -2
Six6Q9QZ28 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Six6Q9QZ28 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Six6Q9QZ28 AC159819.1-201ENSMUST00000213911 328 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Olfr790-204ENSMUST00000218901 1070 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 AC154510.1-201ENSMUST00000223925 737 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC2.55□□□□□ -2
Six6Q9QZ28 Gm23677-201ENSMUST00000083156 104 ntBASIC2.55□□□□□ -2
Six6Q9QZ28 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.55□□□□□ -2
Six6Q9QZ28 Gm42909-201ENSMUST00000196982 3619 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Six6Q9QZ28 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
Six6Q9QZ28 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Amd-ps1-201ENSMUST00000120127 994 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Six6Q9QZ28 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC2.54□□□□□ -2
Six6Q9QZ28 Gm15275-201ENSMUST00000154752 347 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Gm23228-201ENSMUST00000157296 270 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Gm23234-201ENSMUST00000157304 134 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Gm25606-201ENSMUST00000158363 95 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Gm22858-201ENSMUST00000174972 76 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.54□□□□□ -2
Six6Q9QZ28 Gm37670-201ENSMUST00000193622 229 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Gm43899-201ENSMUST00000203675 246 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Gm5339-201ENSMUST00000210551 1102 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Gm18016-201ENSMUST00000216119 801 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Six6Q9QZ28 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC2.54□□□□□ -2
Six6Q9QZ28 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC2.54□□□□□ -2
Six6Q9QZ28 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.54□□□□□ -2
Six6Q9QZ28 Gm23297-201ENSMUST00000083184 127 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC2.54□□□□□ -2
Six6Q9QZ28 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.54□□□□□ -2
Six6Q9QZ28 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Six6Q9QZ28 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Six6Q9QZ28 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Six6Q9QZ28 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Six6Q9QZ28 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Six6Q9QZ28 Gm3089-201ENSMUST00000200804 1395 ntBASIC2.53□□□□□ -2
Six6Q9QZ28 Gm3302-201ENSMUST00000201462 1395 ntBASIC2.53□□□□□ -2
Six6Q9QZ28 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.53□□□□□ -2
Six6Q9QZ28 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.53□□□□□ -2
Six6Q9QZ28 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
Six6Q9QZ28 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC2.53□□□□□ -2
Six6Q9QZ28 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC2.53□□□□□ -2
Six6Q9QZ28 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC2.53□□□□□ -2
Six6Q9QZ28 Gm13009-201ENSMUST00000121307 267 ntBASIC2.53□□□□□ -2
Six6Q9QZ28 Gm8840-201ENSMUST00000122454 386 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms