Protein–RNA interactions for Protein: Q9QUK3

Cln8, Protein CLN8, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln8Q9QUK3 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm14554-201ENSMUST00000119548 661 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm14599-201ENSMUST00000120469 474 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm11404-201ENSMUST00000120872 494 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm12372-201ENSMUST00000121654 768 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm22480-201ENSMUST00000122568 128 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm23123-201ENSMUST00000157648 144 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm24727-201ENSMUST00000158231 144 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm25971-201ENSMUST00000158953 286 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Mir6975-201ENSMUST00000184879 61 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm28920-201ENSMUST00000189957 699 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm44088-201ENSMUST00000204595 237 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Cln8Q9QUK3 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm23697-201ENSMUST00000103897 110 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm15001-201ENSMUST00000117657 795 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm11708-201ENSMUST00000119530 832 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm3835-201ENSMUST00000120752 403 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm15263-201ENSMUST00000121556 642 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm7846-201ENSMUST00000145844 274 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm22890-201ENSMUST00000158642 144 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm24417-201ENSMUST00000178123 79 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm24653-201ENSMUST00000178541 79 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm25934-201ENSMUST00000178642 79 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm28654-201ENSMUST00000189801 379 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm37603-201ENSMUST00000192368 219 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm37239-201ENSMUST00000193510 141 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm18194-201ENSMUST00000210455 481 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm26176-201ENSMUST00000083795 105 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm10242-201ENSMUST00000090064 330 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cln8Q9QUK3 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.34□□□□□ -1.87
Cln8Q9QUK3 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Cln8Q9QUK3 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.88
Cln8Q9QUK3 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Cln8Q9QUK3 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Cln8Q9QUK3 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Cln8Q9QUK3 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cln8Q9QUK3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cln8Q9QUK3 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cln8Q9QUK3 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms