Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Mir693-201ENSMUST00000102187 89 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm15195-201ENSMUST00000118775 263 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm13678-201ENSMUST00000118926 340 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm12808-201ENSMUST00000120597 404 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm14253-201ENSMUST00000122112 639 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm14578-201ENSMUST00000122166 391 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm23716-201ENSMUST00000157348 144 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm24113-201ENSMUST00000157477 276 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Mir1946b-201ENSMUST00000157853 133 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm22766-201ENSMUST00000158372 99 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm22693-201ENSMUST00000175049 442 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm28030-201ENSMUST00000184987 138 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm37501-201ENSMUST00000192830 691 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm43524-201ENSMUST00000197278 298 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm43710-201ENSMUST00000199583 452 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm18039-201ENSMUST00000217816 728 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm8158-201ENSMUST00000219220 465 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Gm8112-201ENSMUST00000219637 465 ntBASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Trem1Q9JKE2 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm14537-201ENSMUST00000117464 599 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm12520-201ENSMUST00000117493 316 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm7123-201ENSMUST00000117647 213 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm11693-201ENSMUST00000119625 565 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm15168-201ENSMUST00000121057 316 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm15263-201ENSMUST00000121556 642 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Zakit-201ENSMUST00000157677 308 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm15796-201ENSMUST00000162135 204 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm22177-201ENSMUST00000175002 158 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Mir5110-201ENSMUST00000175537 87 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm25412-201ENSMUST00000180258 107 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Mir1957b-201ENSMUST00000184608 123 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Igkv2-107-201ENSMUST00000196000 313 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm33626-201ENSMUST00000206790 828 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm19096-201ENSMUST00000209705 766 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trem1Q9JKE2 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm25560-201ENSMUST00000104606 176 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Mir208b-201ENSMUST00000104735 77 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm12112-201ENSMUST00000117772 231 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm14627-201ENSMUST00000118931 567 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm12852-201ENSMUST00000119478 719 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm15364-201ENSMUST00000119618 585 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm10444-201ENSMUST00000126708 148 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm22314-201ENSMUST00000158007 281 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm22536-201ENSMUST00000158171 134 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Mir5106-201ENSMUST00000174936 73 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm28390-201ENSMUST00000185212 700 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm9687-201ENSMUST00000189312 602 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm32447-201ENSMUST00000194265 697 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm36259-201ENSMUST00000197340 392 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm19243-201ENSMUST00000198592 269 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm17887-201ENSMUST00000200194 547 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm2926-201ENSMUST00000205625 239 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.38□□□□□ -1.87
Trem1Q9JKE2 Gm45228-201ENSMUST00000206585 352 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms