Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm18791-201ENSMUST00000204611 726 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm4587-201ENSMUST00000209135 637 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 AC133076.1-201ENSMUST00000228074 484 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm23055-201ENSMUST00000082805 94 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm25008-201ENSMUST00000083809 81 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm19131-202ENSMUST00000203464 3208 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC6.51□□□□□ -1.37
Ube3bQ9ES34 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm25758-201ENSMUST00000103987 129 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm24780-201ENSMUST00000157635 143 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Scarna10-201ENSMUST00000158992 325 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm7609-204ENSMUST00000161424 461 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm7656-201ENSMUST00000182468 1004 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Mir7020-201ENSMUST00000183787 70 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Mir6238-201ENSMUST00000184140 129 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm29665-201ENSMUST00000191457 528 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Mir409-201ENSMUST00000198153 79 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm7040-201ENSMUST00000223271 443 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm10237-201ENSMUST00000078393 273 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm22456-201ENSMUST00000082578 125 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm25126-201ENSMUST00000083343 102 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm42729-201ENSMUST00000201770 2930 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Ube3bQ9ES34 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm14669-201ENSMUST00000118841 250 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm15803-201ENSMUST00000120118 394 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm11582-201ENSMUST00000121041 236 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm25824-201ENSMUST00000157092 121 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm26320-201ENSMUST00000157742 306 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm23162-201ENSMUST00000175081 121 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm27541-201ENSMUST00000184078 122 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm17766-201ENSMUST00000209223 442 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm46993-201ENSMUST00000220708 259 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 AC125484.1-201ENSMUST00000223218 234 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 AC154515.2-201ENSMUST00000226093 406 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Mir337-201ENSMUST00000083592 97 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Ube3bQ9ES34 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms