Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm45474-201ENSMUST00000209471 408 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm29884-201ENSMUST00000218403 453 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 AC154562.1-201ENSMUST00000226140 966 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm10704-201ENSMUST00000098952 730 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.4□□□□□ -1.87
Lima1Q9ERG0 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm12090-201ENSMUST00000118692 758 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm11704-201ENSMUST00000120031 214 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm16005-201ENSMUST00000120515 269 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm11896-201ENSMUST00000121105 820 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm22036-201ENSMUST00000157279 215 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm23084-201ENSMUST00000157850 114 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm26045-201ENSMUST00000157862 97 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm23782-201ENSMUST00000157939 120 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm3010-201ENSMUST00000198805 448 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm45539-201ENSMUST00000210313 428 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm45327-201ENSMUST00000211612 565 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm24917-201ENSMUST00000083935 104 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.39□□□□□ -1.87
Lima1Q9ERG0 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Gm26145-201ENSMUST00000104476 127 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Gm11385-201ENSMUST00000121513 570 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Gm4725-201ENSMUST00000151048 587 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Gm18406-201ENSMUST00000185872 669 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Trbv8-201ENSMUST00000194020 285 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Gm45063-201ENSMUST00000203726 472 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Gm45778-201ENSMUST00000211959 153 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Diaph3-206ENSMUST00000226745 713 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Lima1Q9ERG0 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm15268-201ENSMUST00000118845 352 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm11890-201ENSMUST00000119585 417 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm15120-201ENSMUST00000120602 301 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm13692-201ENSMUST00000120774 371 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Gm24061-201ENSMUST00000157489 120 ntBASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Lima1Q9ERG0 Mir3104-201ENSMUST00000174911 63 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms