Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.45□□□□□ -1.86
Cdc40Q9DC48 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.45□□□□□ -1.86
Cdc40Q9DC48 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm11829-201ENSMUST00000121003 282 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm23152-201ENSMUST00000175322 116 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm18900-201ENSMUST00000193218 584 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm17781-201ENSMUST00000195232 649 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm18672-201ENSMUST00000208035 270 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm17989-201ENSMUST00000211543 412 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm45379-201ENSMUST00000211772 549 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm5917-201ENSMUST00000217638 721 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Snora7a-201ENSMUST00000082629 140 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
Cdc40Q9DC48 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm11923-201ENSMUST00000118135 508 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm11600-201ENSMUST00000119592 240 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm25105-201ENSMUST00000122477 130 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm16373-201ENSMUST00000129517 303 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm24811-201ENSMUST00000175313 100 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm38098-201ENSMUST00000194115 241 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm19243-201ENSMUST00000198592 269 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm43651-201ENSMUST00000199796 439 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm45078-201ENSMUST00000205343 546 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm12582-201ENSMUST00000030555 697 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm5265-201ENSMUST00000076828 342 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm23736-201ENSMUST00000082553 75 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cdc40Q9DC48 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm23123-201ENSMUST00000157648 144 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm25667-201ENSMUST00000157701 275 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm24727-201ENSMUST00000158231 144 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm25898-201ENSMUST00000158303 106 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm25977-201ENSMUST00000158697 85 ntBASIC3.42□□□□□ -1.86
Cdc40Q9DC48 Gm17030-201ENSMUST00000167016 393 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms