Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm22226-201ENSMUST00000157355 109 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm23257-201ENSMUST00000158322 132 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm4479-201ENSMUST00000178807 171 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm27445-201ENSMUST00000184484 72 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Mir6715-201ENSMUST00000184990 57 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm38334-201ENSMUST00000195060 313 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm7946-201ENSMUST00000203326 958 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm44084-201ENSMUST00000203947 409 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm5917-201ENSMUST00000217638 721 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm23297-201ENSMUST00000083184 127 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Snora31-201ENSMUST00000083213 130 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm25630-201ENSMUST00000084000 162 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc3Q9D6Y1 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm9157-201ENSMUST00000117673 225 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm14570-201ENSMUST00000119444 391 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm14534-201ENSMUST00000120045 357 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm13557-201ENSMUST00000120771 382 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Mir6398-201ENSMUST00000184541 102 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm18441-201ENSMUST00000223539 617 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm10237-201ENSMUST00000078393 273 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc3Q9D6Y1 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Gm23532-201ENSMUST00000104569 112 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Gm12578-201ENSMUST00000121244 417 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Gm17091-201ENSMUST00000163248 357 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Gm6947-201ENSMUST00000186254 78 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Gm9775-201ENSMUST00000189402 331 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Gm18445-201ENSMUST00000195502 774 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc3Q9D6Y1 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc3Q9D6Y1 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms