Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm25739-201ENSMUST00000082886 107 ntBASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc39Q9D5Y1 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm23942-201ENSMUST00000101956 107 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm12691-201ENSMUST00000120186 456 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm12543-201ENSMUST00000120410 543 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm23152-201ENSMUST00000175322 116 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm14527-201ENSMUST00000179300 639 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Mir7658-201ENSMUST00000184043 57 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Mir6715-201ENSMUST00000184990 57 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm42926-201ENSMUST00000200496 697 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm10297-201ENSMUST00000207136 651 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm18194-201ENSMUST00000210455 481 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Gm5649-201ENSMUST00000217918 951 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 AC154424.1-201ENSMUST00000225883 799 ntBASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc39Q9D5Y1 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm36962-201ENSMUST00000192114 1761 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm14623-201ENSMUST00000121398 603 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm25572-201ENSMUST00000157527 172 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm24965-201ENSMUST00000157922 106 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm25977-201ENSMUST00000158697 85 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm27580-201ENSMUST00000183666 149 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm27952-201ENSMUST00000184748 105 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Trbv8-201ENSMUST00000194020 285 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm36943-201ENSMUST00000194422 282 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm38234-201ENSMUST00000195204 421 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm43476-201ENSMUST00000197873 405 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm43651-201ENSMUST00000199796 439 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 AC122465.3-201ENSMUST00000221644 355 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 AC159293.2-201ENSMUST00000222289 424 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 CT030166.1-201ENSMUST00000222654 357 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm25581-201ENSMUST00000083410 164 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.3□□□□□ -1.72
Ccdc39Q9D5Y1 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm14163-201ENSMUST00000117342 217 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm5943-201ENSMUST00000119458 459 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm14926-201ENSMUST00000120650 508 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm22792-201ENSMUST00000157225 133 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm23123-201ENSMUST00000157648 144 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm24727-201ENSMUST00000158231 144 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm24930-201ENSMUST00000158315 83 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm16026-202ENSMUST00000159695 772 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm9890-201ENSMUST00000171867 537 ntBASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc39Q9D5Y1 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms