Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.29□□□□□ -1.72
Smc1aQ9CU62 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm25097-201ENSMUST00000104042 145 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm11433-201ENSMUST00000118318 228 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm13359-201ENSMUST00000119000 695 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm11692-201ENSMUST00000122121 902 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm13131-201ENSMUST00000122228 321 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm26148-201ENSMUST00000157430 68 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm24553-201ENSMUST00000158653 131 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm22398-201ENSMUST00000174941 125 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm25731-201ENSMUST00000175167 125 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm4644-201ENSMUST00000197587 400 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm18540-201ENSMUST00000204025 526 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm44703-201ENSMUST00000205724 248 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 AC134254.4-201ENSMUST00000223086 370 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 AC140393.2-201ENSMUST00000226894 943 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm23443-201ENSMUST00000082916 128 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Gm10704-201ENSMUST00000098952 730 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.28□□□□□ -1.72
Smc1aQ9CU62 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Smc1aQ9CU62 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm4736-201ENSMUST00000100870 380 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Mir804-201ENSMUST00000103251 95 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm11488-201ENSMUST00000117277 863 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm12693-201ENSMUST00000121965 483 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm24592-201ENSMUST00000122505 106 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm22988-201ENSMUST00000122759 144 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm26005-201ENSMUST00000158802 134 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm15974-201ENSMUST00000159103 531 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm17030-201ENSMUST00000167016 393 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm20773-201ENSMUST00000178940 681 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm44887-201ENSMUST00000208980 178 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm7380-201ENSMUST00000211599 466 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm18120-201ENSMUST00000220079 511 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm5176-202ENSMUST00000220267 583 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.27□□□□□ -1.73
Smc1aQ9CU62 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm6797-201ENSMUST00000119440 512 ntBASIC4.26□□□□□ -1.73
Smc1aQ9CU62 Gm16100-201ENSMUST00000120489 231 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms