Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm16171-201ENSMUST00000118004 324 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm29148-201ENSMUST00000188140 336 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm19124-201ENSMUST00000191041 832 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm5552-201ENSMUST00000197149 515 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm43600-201ENSMUST00000202134 223 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm24698-201ENSMUST00000083883 130 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Gm35405-201ENSMUST00000218754 400 ntBASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cdh23Q99PF4 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Gm12598-201ENSMUST00000117333 830 ntBASIC3.1□□□□□ -1.91
Cdh23Q99PF4 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Gm44623-201ENSMUST00000207934 434 ntBASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Gm37124-201ENSMUST00000192140 1992 ntBASIC3.1□□□□□ -1.91
Cdh23Q99PF4 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Gm16332-201ENSMUST00000134229 2967 ntBASIC3.1□□□□□ -1.91
Cdh23Q99PF4 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Gm10723-201ENSMUST00000195366 6918 ntBASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
Cdh23Q99PF4 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Gm15361-201ENSMUST00000119320 444 ntBASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Gm9435-201ENSMUST00000120379 877 ntBASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Gm29330-201ENSMUST00000190032 699 ntBASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Gm28098-201ENSMUST00000191361 699 ntBASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Gm45013-201ENSMUST00000206883 178 ntBASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Gm7439-201ENSMUST00000214053 835 ntBASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Gm9587-201ENSMUST00000172449 454 ntBASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Gm7422-201ENSMUST00000220115 640 ntBASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.09□□□□□ -1.91
Cdh23Q99PF4 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Cdh23Q99PF4 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC3.09□□□□□ -1.92
Cdh23Q99PF4 Gm11905-201ENSMUST00000117653 678 ntBASIC3.09□□□□□ -1.92
Cdh23Q99PF4 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.09□□□□□ -1.92
Cdh23Q99PF4 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.09□□□□□ -1.92
Cdh23Q99PF4 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.09□□□□□ -1.92
Cdh23Q99PF4 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Cdh23Q99PF4 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Cdh23Q99PF4 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Cdh23Q99PF4 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Cdh23Q99PF4 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Cdh23Q99PF4 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Cdh23Q99PF4 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.08□□□□□ -1.92
Cdh23Q99PF4 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Cdh23Q99PF4 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.08□□□□□ -1.92
Cdh23Q99PF4 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cdh23Q99PF4 Gm15272-201ENSMUST00000120865 233 ntBASIC3.08□□□□□ -1.92
Cdh23Q99PF4 Gm24402-201ENSMUST00000157873 91 ntBASIC3.08□□□□□ -1.92
Cdh23Q99PF4 Gm24213-201ENSMUST00000158255 258 ntBASIC3.08□□□□□ -1.92
Cdh23Q99PF4 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.08□□□□□ -1.92
Cdh23Q99PF4 Mir6386-201ENSMUST00000183558 104 ntBASIC3.08□□□□□ -1.92
Cdh23Q99PF4 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Cdh23Q99PF4 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Cdh23Q99PF4 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.08□□□□□ -1.92
Cdh23Q99PF4 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms