Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm13751-201ENSMUST00000120280 752 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm11398-201ENSMUST00000120330 320 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Mir3058-201ENSMUST00000175126 91 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Snord116l12-201ENSMUST00000179816 94 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm18356-201ENSMUST00000185677 623 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm37418-201ENSMUST00000195031 274 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm42622-201ENSMUST00000197229 355 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm18026-201ENSMUST00000222789 727 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 AC138667.2-201ENSMUST00000224880 598 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 AC150560.2-201ENSMUST00000227208 171 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm23099-201ENSMUST00000083454 139 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Gm336-201ENSMUST00000186376 1480 ntBASIC5.2□□□□□ -1.58
Brf1Q8CFK2 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm24430-201ENSMUST00000104077 104 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm15426-201ENSMUST00000117823 556 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm14688-201ENSMUST00000119169 303 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm13162-201ENSMUST00000121481 454 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm14916-201ENSMUST00000121904 204 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm24289-201ENSMUST00000157629 135 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm17109-201ENSMUST00000163985 358 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm3191-201ENSMUST00000167139 346 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm25874-201ENSMUST00000178030 79 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm26993-201ENSMUST00000182766 789 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm29228-201ENSMUST00000185489 418 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Brf1Q8CFK2 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Brf1Q8CFK2 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Brf1Q8CFK2 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Gm14628-201ENSMUST00000117508 635 ntBASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Gm13550-201ENSMUST00000118185 525 ntBASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Gm14927-201ENSMUST00000120283 454 ntBASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Gm13743-201ENSMUST00000121486 724 ntBASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Mir1947-201ENSMUST00000158235 85 ntBASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC5.18□□□□□ -1.58
Brf1Q8CFK2 Gm27875-201ENSMUST00000184425 123 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms